Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Rprl3-201ENSMUST00000157400 290 ntBASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx5Q9JL61 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx5Q9JL61 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx5Q9JL61 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Rfx5Q9JL61 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx5Q9JL61 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx5Q9JL61 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx5Q9JL61 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx5Q9JL61 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.17■□□□□ 0.34
Rfx5Q9JL61 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rfx5Q9JL61 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx5Q9JL61 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx5Q9JL61 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rfx5Q9JL61 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Rfx5Q9JL61 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx5Q9JL61 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx5Q9JL61 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx5Q9JL61 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx5Q9JL61 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx5Q9JL61 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx5Q9JL61 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rfx5Q9JL61 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx5Q9JL61 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Gm15372-201ENSMUST00000120729 834 ntBASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Gm44454-201ENSMUST00000198541 138 ntBASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx5Q9JL61 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.15■□□□□ 0.34
Rfx5Q9JL61 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms