Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Herpud1Q9JJK5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Herpud1Q9JJK5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.57□□□□□ -0.24
Herpud1Q9JJK5 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Herpud1Q9JJK5 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Herpud1Q9JJK5 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.57□□□□□ -0.24
Herpud1Q9JJK5 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Herpud1Q9JJK5 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.57□□□□□ -0.24
Herpud1Q9JJK5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.57□□□□□ -0.24
Herpud1Q9JJK5 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Gm7370-201ENSMUST00000219471 767 ntBASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herpud1Q9JJK5 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Actl10-202ENSMUST00000226583 1501 ntBASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Phf7-203ENSMUST00000226565 1971 ntBASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Gm5417-201ENSMUST00000079706 384 ntBASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Herpud1Q9JJK5 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Herpud1Q9JJK5 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Herpud1Q9JJK5 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Herpud1Q9JJK5 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Herpud1Q9JJK5 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Herpud1Q9JJK5 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Herpud1Q9JJK5 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Herpud1Q9JJK5 Gm11539-201ENSMUST00000119837 557 ntBASIC13.54□□□□□ -0.24
Herpud1Q9JJK5 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Herpud1Q9JJK5 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Herpud1Q9JJK5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms