Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgn3Q9DCB1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgn3Q9DCB1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgn3Q9DCB1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.35■□□□□ 0.05
Hmgn3Q9DCB1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgn3Q9DCB1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgn3Q9DCB1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Hmgn3Q9DCB1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgn3Q9DCB1 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hmgn3Q9DCB1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgn3Q9DCB1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgn3Q9DCB1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Hmgn3Q9DCB1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.34■□□□□ 0.05
Hmgn3Q9DCB1 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgn3Q9DCB1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgn3Q9DCB1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Hmgn3Q9DCB1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Hmgn3Q9DCB1 Gm5408-201ENSMUST00000197998 747 ntBASIC15.34■□□□□ 0.05
Hmgn3Q9DCB1 Gm10138-203ENSMUST00000206952 366 ntBASIC15.34■□□□□ 0.05
Hmgn3Q9DCB1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Hmgn3Q9DCB1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgn3Q9DCB1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.34■□□□□ 0.05
Hmgn3Q9DCB1 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgn3Q9DCB1 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Hmgn3Q9DCB1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Hmgn3Q9DCB1 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Hmgn3Q9DCB1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgn3Q9DCB1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgn3Q9DCB1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgn3Q9DCB1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hmgn3Q9DCB1 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Hmgn3Q9DCB1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.33■□□□□ 0.05
Hmgn3Q9DCB1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
Hmgn3Q9DCB1 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Hmgn3Q9DCB1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn3Q9DCB1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn3Q9DCB1 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn3Q9DCB1 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn3Q9DCB1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Hmgn3Q9DCB1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn3Q9DCB1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.33■□□□□ 0.04
Hmgn3Q9DCB1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn3Q9DCB1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn3Q9DCB1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn3Q9DCB1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn3Q9DCB1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn3Q9DCB1 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn3Q9DCB1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Hmgn3Q9DCB1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn3Q9DCB1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.33■□□□□ 0.04
Hmgn3Q9DCB1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn3Q9DCB1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Hmgn3Q9DCB1 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hmgn3Q9DCB1 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Mtag2-201ENSMUST00000058665 714 ntBASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hmgn3Q9DCB1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Rab3c-203ENSMUST00000224180 967 ntBASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Hmgn3Q9DCB1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms