Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rrp8Q9DB85 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rrp8Q9DB85 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Rrp8Q9DB85 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rrp8Q9DB85 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Rrp8Q9DB85 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rrp8Q9DB85 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rrp8Q9DB85 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.92■□□□□ 0.14
Rrp8Q9DB85 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rrp8Q9DB85 Gm6550-201ENSMUST00000187574 993 ntBASIC15.92■□□□□ 0.14
Rrp8Q9DB85 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.92■□□□□ 0.14
Rrp8Q9DB85 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rrp8Q9DB85 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rrp8Q9DB85 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rrp8Q9DB85 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.92■□□□□ 0.14
Rrp8Q9DB85 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.92■□□□□ 0.14
Rrp8Q9DB85 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rrp8Q9DB85 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Rrp8Q9DB85 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.92■□□□□ 0.14
Rrp8Q9DB85 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rrp8Q9DB85 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rrp8Q9DB85 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rrp8Q9DB85 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Gm27702-201ENSMUST00000184512 56 ntBASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Gm6089-201ENSMUST00000197666 938 ntBASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.91■□□□□ 0.14
Rrp8Q9DB85 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Rrp8Q9DB85 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.9■□□□□ 0.14
Rrp8Q9DB85 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Gm9172-201ENSMUST00000212092 954 ntBASIC15.9■□□□□ 0.14
Rrp8Q9DB85 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rrp8Q9DB85 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rrp8Q9DB85 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rrp8Q9DB85 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Rrp8Q9DB85 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.89■□□□□ 0.13
Rrp8Q9DB85 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rrp8Q9DB85 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rrp8Q9DB85 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rrp8Q9DB85 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.89■□□□□ 0.13
Rrp8Q9DB85 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rrp8Q9DB85 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms