Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gtf3c6Q9D8P7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Gtf3c6Q9D8P7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gtf3c6Q9D8P7 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gtf3c6Q9D8P7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gtf3c6Q9D8P7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gtf3c6Q9D8P7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.38■□□□□ 0.37
Gtf3c6Q9D8P7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Gtf3c6Q9D8P7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gtf3c6Q9D8P7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Gtf3c6Q9D8P7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gtf3c6Q9D8P7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gtf3c6Q9D8P7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gtf3c6Q9D8P7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gtf3c6Q9D8P7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Gtf3c6Q9D8P7 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gtf3c6Q9D8P7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gtf3c6Q9D8P7 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Gtf3c6Q9D8P7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gtf3c6Q9D8P7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gtf3c6Q9D8P7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.38■□□□□ 0.37
Gtf3c6Q9D8P7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gtf3c6Q9D8P7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Gtf3c6Q9D8P7 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gtf3c6Q9D8P7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gtf3c6Q9D8P7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gtf3c6Q9D8P7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gtf3c6Q9D8P7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gtf3c6Q9D8P7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gtf3c6Q9D8P7 Gm10013-201ENSMUST00000106074 672 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms