Protein–RNA interactions for Protein: Q9D8D0

Tnfrsf13c, Tumor necrosis factor receptor superfamily member 13C, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13cQ9D8D0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf13cQ9D8D0 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf13cQ9D8D0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Tnfrsf13cQ9D8D0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf13cQ9D8D0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf13cQ9D8D0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf13cQ9D8D0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf13cQ9D8D0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf13cQ9D8D0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Tnfrsf13cQ9D8D0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf13cQ9D8D0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf13cQ9D8D0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf13cQ9D8D0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf13cQ9D8D0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Tnfrsf13cQ9D8D0 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf13cQ9D8D0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf13cQ9D8D0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Prob1-201ENSMUST00000097619 3021 ntBASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Gm13158-201ENSMUST00000122007 736 ntBASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.74□□□□□ -0.37
Tnfrsf13cQ9D8D0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf13cQ9D8D0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf13cQ9D8D0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf13cQ9D8D0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf13cQ9D8D0 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf13cQ9D8D0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tnfrsf13cQ9D8D0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf13cQ9D8D0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf13cQ9D8D0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf13cQ9D8D0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.72□□□□□ -0.37
Tnfrsf13cQ9D8D0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tnfrsf13cQ9D8D0 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.72□□□□□ -0.37
Tnfrsf13cQ9D8D0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf13cQ9D8D0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf13cQ9D8D0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf13cQ9D8D0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf13cQ9D8D0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf13cQ9D8D0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Tnfrsf13cQ9D8D0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf13cQ9D8D0 Gm12896-201ENSMUST00000118430 226 ntBASIC12.72□□□□□ -0.37
Tnfrsf13cQ9D8D0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf13cQ9D8D0 Gm18025-201ENSMUST00000221733 862 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms