Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Stag1Q9D3E6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Stag1Q9D3E6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Stag1Q9D3E6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Stag1Q9D3E6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Stag1Q9D3E6 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Stag1Q9D3E6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Stag1Q9D3E6 Gm13418-201ENSMUST00000119097 944 ntBASIC19.34■□□□□ 0.69
Stag1Q9D3E6 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.34■□□□□ 0.69
Stag1Q9D3E6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
Stag1Q9D3E6 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.34■□□□□ 0.69
Stag1Q9D3E6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Stag1Q9D3E6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.34■□□□□ 0.69
Stag1Q9D3E6 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.34■□□□□ 0.69
Stag1Q9D3E6 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.34■□□□□ 0.69
Stag1Q9D3E6 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Stag1Q9D3E6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Stag1Q9D3E6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Stag1Q9D3E6 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Stag1Q9D3E6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Stag1Q9D3E6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Stag1Q9D3E6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Stag1Q9D3E6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Stag1Q9D3E6 Gm25990-201ENSMUST00000102440 86 ntBASIC19.33■□□□□ 0.68
Stag1Q9D3E6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Stag1Q9D3E6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Stag1Q9D3E6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Stag1Q9D3E6 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.33■□□□□ 0.68
Stag1Q9D3E6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Stag1Q9D3E6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Stag1Q9D3E6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Stag1Q9D3E6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Stag1Q9D3E6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Stag1Q9D3E6 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Stag1Q9D3E6 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.33■□□□□ 0.68
Stag1Q9D3E6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.32■□□□□ 0.68
Stag1Q9D3E6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Stag1Q9D3E6 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Stag1Q9D3E6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Stag1Q9D3E6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Stag1Q9D3E6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Stag1Q9D3E6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Stag1Q9D3E6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Stag1Q9D3E6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Stag1Q9D3E6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Stag1Q9D3E6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Stag1Q9D3E6 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Stag1Q9D3E6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Stag1Q9D3E6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.32■□□□□ 0.68
Stag1Q9D3E6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Stag1Q9D3E6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Stag1Q9D3E6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Stag1Q9D3E6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Stag1Q9D3E6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Gm4459-201ENSMUST00000118750 468 ntBASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.31■□□□□ 0.68
Stag1Q9D3E6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.31■□□□□ 0.68
Stag1Q9D3E6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Stag1Q9D3E6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Gm12497-201ENSMUST00000138778 237 ntBASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Gm7230-201ENSMUST00000173026 815 ntBASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Stag1Q9D3E6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms