Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc3Q9CW03 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc3Q9CW03 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc3Q9CW03 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc3Q9CW03 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc3Q9CW03 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smc3Q9CW03 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc3Q9CW03 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smc3Q9CW03 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.17■□□□□ 0.66
Smc3Q9CW03 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.16■□□□□ 0.66
Smc3Q9CW03 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc3Q9CW03 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc3Q9CW03 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc3Q9CW03 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc3Q9CW03 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc3Q9CW03 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc3Q9CW03 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Smc3Q9CW03 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc3Q9CW03 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc3Q9CW03 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc3Q9CW03 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Smc3Q9CW03 Gm44450-201ENSMUST00000199528 114 ntBASIC19.16■□□□□ 0.66
Smc3Q9CW03 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.16■□□□□ 0.66
Smc3Q9CW03 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Smc3Q9CW03 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Smc3Q9CW03 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc3Q9CW03 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc3Q9CW03 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc3Q9CW03 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc3Q9CW03 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc3Q9CW03 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.16■□□□□ 0.66
Smc3Q9CW03 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.16■□□□□ 0.66
Smc3Q9CW03 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smc3Q9CW03 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc3Q9CW03 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smc3Q9CW03 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.15■□□□□ 0.66
Smc3Q9CW03 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc3Q9CW03 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc3Q9CW03 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc3Q9CW03 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC19.15■□□□□ 0.66
Smc3Q9CW03 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Smc3Q9CW03 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc3Q9CW03 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.15■□□□□ 0.66
Smc3Q9CW03 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.15■□□□□ 0.66
Smc3Q9CW03 Gm27011-201ENSMUST00000182352 972 ntBASIC19.15■□□□□ 0.66
Smc3Q9CW03 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.15■□□□□ 0.66
Smc3Q9CW03 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc3Q9CW03 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc3Q9CW03 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smc3Q9CW03 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc3Q9CW03 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smc3Q9CW03 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smc3Q9CW03 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smc3Q9CW03 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.14■□□□□ 0.66
Smc3Q9CW03 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smc3Q9CW03 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.14■□□□□ 0.66
Smc3Q9CW03 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Smc3Q9CW03 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc3Q9CW03 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Smc3Q9CW03 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Smc3Q9CW03 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Smc3Q9CW03 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc3Q9CW03 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Smc3Q9CW03 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc3Q9CW03 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smc3Q9CW03 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc3Q9CW03 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc3Q9CW03 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Smc3Q9CW03 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.14■□□□□ 0.65
Smc3Q9CW03 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smc3Q9CW03 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smc3Q9CW03 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smc3Q9CW03 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.14■□□□□ 0.65
Smc3Q9CW03 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Smc3Q9CW03 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.13■□□□□ 0.65
Smc3Q9CW03 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smc3Q9CW03 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Smc3Q9CW03 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.13■□□□□ 0.65
Smc3Q9CW03 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smc3Q9CW03 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms