Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
RTRAFQ9CQE8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
RTRAFQ9CQE8 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RTRAFQ9CQE8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTRAFQ9CQE8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RTRAFQ9CQE8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
RTRAFQ9CQE8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTRAFQ9CQE8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RTRAFQ9CQE8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTRAFQ9CQE8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTRAFQ9CQE8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTRAFQ9CQE8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTRAFQ9CQE8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RTRAFQ9CQE8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.31□□□□□ -0.28
RTRAFQ9CQE8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTRAFQ9CQE8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RTRAFQ9CQE8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.31□□□□□ -0.28
RTRAFQ9CQE8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
RTRAFQ9CQE8 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.31□□□□□ -0.28
RTRAFQ9CQE8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.31□□□□□ -0.28
RTRAFQ9CQE8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.31□□□□□ -0.28
RTRAFQ9CQE8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTRAFQ9CQE8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTRAFQ9CQE8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTRAFQ9CQE8 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RTRAFQ9CQE8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RTRAFQ9CQE8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTRAFQ9CQE8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTRAFQ9CQE8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTRAFQ9CQE8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTRAFQ9CQE8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTRAFQ9CQE8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RTRAFQ9CQE8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTRAFQ9CQE8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTRAFQ9CQE8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTRAFQ9CQE8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RTRAFQ9CQE8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RTRAFQ9CQE8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RTRAFQ9CQE8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RTRAFQ9CQE8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RTRAFQ9CQE8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTRAFQ9CQE8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RTRAFQ9CQE8 Flg-201ENSMUST00000050758 1488 ntBASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Gm11643-201ENSMUST00000119578 864 ntBASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RTRAFQ9CQE8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RTRAFQ9CQE8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RTRAFQ9CQE8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RTRAFQ9CQE8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
RTRAFQ9CQE8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RTRAFQ9CQE8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms