Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Gm22238-201ENSMUST00000175222 88 ntBASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Chchd1Q9CQA6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Chchd1Q9CQA6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 Smad6-203ENSMUST00000179458 273 ntBASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Chchd1Q9CQA6 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Chchd1Q9CQA6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Chchd1Q9CQA6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.33□□□□□ -0.44
Chchd1Q9CQA6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms