Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Prpf8Q99PV0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Gm2756-201ENSMUST00000195851 400 ntBASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Gm7230-201ENSMUST00000173026 815 ntBASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Prpf8Q99PV0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.3□□□□□ -0.28
Prpf8Q99PV0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Gm6736-201ENSMUST00000166583 948 ntBASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Prpf8Q99PV0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf8Q99PV0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms