Protein–RNA interactions for Protein: Q99NE9

Pbx4, Pre-B-cell leukemia transcription factor 4, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx4Q99NE9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pbx4Q99NE9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Pbx4Q99NE9 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.77■□□□□ 0.44
Pbx4Q99NE9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pbx4Q99NE9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pbx4Q99NE9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pbx4Q99NE9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pbx4Q99NE9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pbx4Q99NE9 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pbx4Q99NE9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.77■□□□□ 0.44
Pbx4Q99NE9 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Pbx4Q99NE9 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pbx4Q99NE9 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pbx4Q99NE9 Gm27618-201ENSMUST00000183671 60 ntBASIC17.77■□□□□ 0.44
Pbx4Q99NE9 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pbx4Q99NE9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pbx4Q99NE9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pbx4Q99NE9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pbx4Q99NE9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pbx4Q99NE9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Mir6420-201ENSMUST00000185032 102 ntBASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pbx4Q99NE9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pbx4Q99NE9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pbx4Q99NE9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pbx4Q99NE9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pbx4Q99NE9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pbx4Q99NE9 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pbx4Q99NE9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pbx4Q99NE9 Gm12490-201ENSMUST00000120255 560 ntBASIC17.75■□□□□ 0.43
Pbx4Q99NE9 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Pbx4Q99NE9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.75■□□□□ 0.43
Pbx4Q99NE9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.75■□□□□ 0.43
Pbx4Q99NE9 Gm7787-201ENSMUST00000216858 688 ntBASIC17.75■□□□□ 0.43
Pbx4Q99NE9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pbx4Q99NE9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pbx4Q99NE9 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.75■□□□□ 0.43
Pbx4Q99NE9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.75■□□□□ 0.43
Pbx4Q99NE9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pbx4Q99NE9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Gm27306-201ENSMUST00000183970 107 ntBASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pbx4Q99NE9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pbx4Q99NE9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pbx4Q99NE9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pbx4Q99NE9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pbx4Q99NE9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pbx4Q99NE9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pbx4Q99NE9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pbx4Q99NE9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms