Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 AC158982.1-201ENSMUST00000228377 901 ntBASIC20.06■□□□□ 0.8
RtcbQ99LF4 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RtcbQ99LF4 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.06■□□□□ 0.8
RtcbQ99LF4 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.06■□□□□ 0.8
RtcbQ99LF4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RtcbQ99LF4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RtcbQ99LF4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RtcbQ99LF4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.06■□□□□ 0.8
RtcbQ99LF4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RtcbQ99LF4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RtcbQ99LF4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RtcbQ99LF4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RtcbQ99LF4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RtcbQ99LF4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.05■□□□□ 0.8
RtcbQ99LF4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.05■□□□□ 0.8
RtcbQ99LF4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RtcbQ99LF4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RtcbQ99LF4 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.05■□□□□ 0.8
RtcbQ99LF4 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC20.05■□□□□ 0.8
RtcbQ99LF4 Gm2308-201ENSMUST00000166539 1004 ntBASIC20.05■□□□□ 0.8
RtcbQ99LF4 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RtcbQ99LF4 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC20.05■□□□□ 0.8
RtcbQ99LF4 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC20.05■□□□□ 0.8
RtcbQ99LF4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RtcbQ99LF4 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RtcbQ99LF4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RtcbQ99LF4 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RtcbQ99LF4 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.05■□□□□ 0.8
RtcbQ99LF4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RtcbQ99LF4 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.04■□□□□ 0.8
RtcbQ99LF4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RtcbQ99LF4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RtcbQ99LF4 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RtcbQ99LF4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RtcbQ99LF4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RtcbQ99LF4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RtcbQ99LF4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RtcbQ99LF4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RtcbQ99LF4 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RtcbQ99LF4 Gm27300-201ENSMUST00000184085 97 ntBASIC20.04■□□□□ 0.8
RtcbQ99LF4 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.04■□□□□ 0.8
RtcbQ99LF4 Gm27335-201ENSMUST00000184758 97 ntBASIC20.04■□□□□ 0.8
RtcbQ99LF4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RtcbQ99LF4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RtcbQ99LF4 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.04■□□□□ 0.8
RtcbQ99LF4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RtcbQ99LF4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RtcbQ99LF4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RtcbQ99LF4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.03■□□□□ 0.8
RtcbQ99LF4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RtcbQ99LF4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RtcbQ99LF4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RtcbQ99LF4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
RtcbQ99LF4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RtcbQ99LF4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RtcbQ99LF4 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RtcbQ99LF4 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RtcbQ99LF4 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RtcbQ99LF4 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RtcbQ99LF4 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RtcbQ99LF4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RtcbQ99LF4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RtcbQ99LF4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RtcbQ99LF4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RtcbQ99LF4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RtcbQ99LF4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RtcbQ99LF4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RtcbQ99LF4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
RtcbQ99LF4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RtcbQ99LF4 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RtcbQ99LF4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RtcbQ99LF4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RtcbQ99LF4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RtcbQ99LF4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RtcbQ99LF4 Gm37153-201ENSMUST00000193637 231 ntBASIC20.02■□□□□ 0.8
RtcbQ99LF4 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC20.02■□□□□ 0.8
RtcbQ99LF4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RtcbQ99LF4 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RtcbQ99LF4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
RtcbQ99LF4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RtcbQ99LF4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RtcbQ99LF4 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RtcbQ99LF4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RtcbQ99LF4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RtcbQ99LF4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC20.01■□□□□ 0.79
RtcbQ99LF4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RtcbQ99LF4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RtcbQ99LF4 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RtcbQ99LF4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC20.01■□□□□ 0.79
RtcbQ99LF4 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC20.01■□□□□ 0.79
RtcbQ99LF4 Gm4899-201ENSMUST00000178708 719 ntBASIC20.01■□□□□ 0.79
RtcbQ99LF4 Gm44872-201ENSMUST00000207864 420 ntBASIC20.01■□□□□ 0.79
RtcbQ99LF4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
RtcbQ99LF4 AC117588.1-201ENSMUST00000228510 999 ntBASIC20.01■□□□□ 0.79
RtcbQ99LF4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RtcbQ99LF4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC20.01■□□□□ 0.79
RtcbQ99LF4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RtcbQ99LF4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RtcbQ99LF4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RtcbQ99LF4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms