Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm6736-201ENSMUST00000166583 948 ntBASIC16.43■□□□□ 0.22
Smarcd2Q99JR8 Mir6404-201ENSMUST00000183699 94 ntBASIC16.43■□□□□ 0.22
Smarcd2Q99JR8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcd2Q99JR8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.43■□□□□ 0.22
Smarcd2Q99JR8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcd2Q99JR8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Smarcd2Q99JR8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.43■□□□□ 0.22
Smarcd2Q99JR8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcd2Q99JR8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcd2Q99JR8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcd2Q99JR8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcd2Q99JR8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcd2Q99JR8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Smarcd2Q99JR8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcd2Q99JR8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Smarcd2Q99JR8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcd2Q99JR8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smarcd2Q99JR8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Smarcd2Q99JR8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd2Q99JR8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd2Q99JR8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd2Q99JR8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd2Q99JR8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd2Q99JR8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd2Q99JR8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd2Q99JR8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.41■□□□□ 0.22
Smarcd2Q99JR8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Smarcd2Q99JR8 Gm2756-201ENSMUST00000195851 400 ntBASIC16.41■□□□□ 0.22
Smarcd2Q99JR8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.41■□□□□ 0.22
Smarcd2Q99JR8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd2Q99JR8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd2Q99JR8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd2Q99JR8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.41■□□□□ 0.22
Smarcd2Q99JR8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Smarcd2Q99JR8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd2Q99JR8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd2Q99JR8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Smarcd2Q99JR8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd2Q99JR8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd2Q99JR8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarcd2Q99JR8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.4■□□□□ 0.22
Smarcd2Q99JR8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd2Q99JR8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.4■□□□□ 0.22
Smarcd2Q99JR8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd2Q99JR8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Smarcd2Q99JR8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd2Q99JR8 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.4■□□□□ 0.22
Smarcd2Q99JR8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd2Q99JR8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd2Q99JR8 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.4■□□□□ 0.22
Smarcd2Q99JR8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd2Q99JR8 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.4■□□□□ 0.22
Smarcd2Q99JR8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.4■□□□□ 0.22
Smarcd2Q99JR8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.4■□□□□ 0.22
Smarcd2Q99JR8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd2Q99JR8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd2Q99JR8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd2Q99JR8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd2Q99JR8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd2Q99JR8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd2Q99JR8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd2Q99JR8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarcd2Q99JR8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Smarcd2Q99JR8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.39■□□□□ 0.21
Smarcd2Q99JR8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms