Protein–RNA interactions for Protein: Q99J79

Ddb2, DNA damage-binding protein 2, mousemouse

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb2Q99J79 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.41□□□□□ -0.1
Ddb2Q99J79 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Gm7977-201ENSMUST00000193787 748 ntBASIC14.41□□□□□ -0.1
Ddb2Q99J79 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddb2Q99J79 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddb2Q99J79 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.41□□□□□ -0.1
Ddb2Q99J79 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.41□□□□□ -0.1
Ddb2Q99J79 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddb2Q99J79 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.4□□□□□ -0.1
Ddb2Q99J79 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Gm29518-201ENSMUST00000190858 372 ntBASIC14.4□□□□□ -0.1
Ddb2Q99J79 Gm17808-201ENSMUST00000200859 894 ntBASIC14.4□□□□□ -0.1
Ddb2Q99J79 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddb2Q99J79 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.4□□□□□ -0.11
Ddb2Q99J79 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddb2Q99J79 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.39□□□□□ -0.11
Ddb2Q99J79 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddb2Q99J79 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddb2Q99J79 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddb2Q99J79 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.39□□□□□ -0.11
Ddb2Q99J79 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Ddb2Q99J79 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.39□□□□□ -0.11
Ddb2Q99J79 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ddb2Q99J79 Gm11950-201ENSMUST00000121615 838 ntBASIC14.39□□□□□ -0.11
Ddb2Q99J79 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddb2Q99J79 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddb2Q99J79 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddb2Q99J79 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddb2Q99J79 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddb2Q99J79 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddb2Q99J79 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
Ddb2Q99J79 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddb2Q99J79 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddb2Q99J79 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddb2Q99J79 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddb2Q99J79 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddb2Q99J79 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddb2Q99J79 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddb2Q99J79 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddb2Q99J79 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddb2Q99J79 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.38□□□□□ -0.11
Ddb2Q99J79 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.38□□□□□ -0.11
Ddb2Q99J79 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ddb2Q99J79 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddb2Q99J79 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddb2Q99J79 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddb2Q99J79 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddb2Q99J79 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddb2Q99J79 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddb2Q99J79 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddb2Q99J79 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddb2Q99J79 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms