Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdha3Q91Y16 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Pcdha3Q91Y16 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Pcdha3Q91Y16 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.04■□□□□ 0.32
Pcdha3Q91Y16 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha3Q91Y16 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha3Q91Y16 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdha3Q91Y16 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha3Q91Y16 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdha3Q91Y16 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdha3Q91Y16 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdha3Q91Y16 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdha3Q91Y16 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Gm18421-201ENSMUST00000204122 625 ntBASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Gm45328-201ENSMUST00000210942 917 ntBASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Gm7367-201ENSMUST00000057611 492 ntBASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdha3Q91Y16 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha3Q91Y16 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha3Q91Y16 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha3Q91Y16 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha3Q91Y16 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha3Q91Y16 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha3Q91Y16 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Pcdha3Q91Y16 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha3Q91Y16 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha3Q91Y16 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha3Q91Y16 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha3Q91Y16 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha3Q91Y16 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha3Q91Y16 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha3Q91Y16 Gm21362-201ENSMUST00000194272 928 ntBASIC17.02■□□□□ 0.32
Pcdha3Q91Y16 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Pcdha3Q91Y16 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha3Q91Y16 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdha3Q91Y16 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.02■□□□□ 0.31
Pcdha3Q91Y16 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdha3Q91Y16 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdha3Q91Y16 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdha3Q91Y16 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.02■□□□□ 0.31
Pcdha3Q91Y16 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha3Q91Y16 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha3Q91Y16 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha3Q91Y16 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha3Q91Y16 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha3Q91Y16 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha3Q91Y16 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.01■□□□□ 0.31
Pcdha3Q91Y16 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha3Q91Y16 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdha3Q91Y16 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha3Q91Y16 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.01■□□□□ 0.31
Pcdha3Q91Y16 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha3Q91Y16 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha3Q91Y16 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha3Q91Y16 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha3Q91Y16 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha3Q91Y16 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha3Q91Y16 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha3Q91Y16 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha3Q91Y16 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdha3Q91Y16 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha3Q91Y16 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdha3Q91Y16 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17■□□□□ 0.31
Pcdha3Q91Y16 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha3Q91Y16 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdha3Q91Y16 Gm7284-201ENSMUST00000131667 944 ntBASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms