Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
StrcQ8VIM6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
StrcQ8VIM6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
StrcQ8VIM6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
StrcQ8VIM6 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
StrcQ8VIM6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
StrcQ8VIM6 Gm11424-201ENSMUST00000121929 829 ntBASIC19.35■□□□□ 0.69
StrcQ8VIM6 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC19.35■□□□□ 0.69
StrcQ8VIM6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
StrcQ8VIM6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.35■□□□□ 0.69
StrcQ8VIM6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
StrcQ8VIM6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
StrcQ8VIM6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
StrcQ8VIM6 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
StrcQ8VIM6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
StrcQ8VIM6 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
StrcQ8VIM6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.35■□□□□ 0.69
StrcQ8VIM6 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC19.35■□□□□ 0.69
StrcQ8VIM6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
StrcQ8VIM6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.34■□□□□ 0.69
StrcQ8VIM6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
StrcQ8VIM6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
StrcQ8VIM6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.34■□□□□ 0.69
StrcQ8VIM6 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
StrcQ8VIM6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
StrcQ8VIM6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
StrcQ8VIM6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
StrcQ8VIM6 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
StrcQ8VIM6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
StrcQ8VIM6 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
StrcQ8VIM6 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC19.34■□□□□ 0.69
StrcQ8VIM6 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC19.34■□□□□ 0.69
StrcQ8VIM6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
StrcQ8VIM6 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
StrcQ8VIM6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
StrcQ8VIM6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
StrcQ8VIM6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
StrcQ8VIM6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
StrcQ8VIM6 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
StrcQ8VIM6 Fgf17-202ENSMUST00000227123 1336 ntBASIC19.33■□□□□ 0.69
StrcQ8VIM6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
StrcQ8VIM6 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
StrcQ8VIM6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
StrcQ8VIM6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
StrcQ8VIM6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
StrcQ8VIM6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
StrcQ8VIM6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
StrcQ8VIM6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
StrcQ8VIM6 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
StrcQ8VIM6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
StrcQ8VIM6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
StrcQ8VIM6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
StrcQ8VIM6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
StrcQ8VIM6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.33■□□□□ 0.68
StrcQ8VIM6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
StrcQ8VIM6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
StrcQ8VIM6 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
StrcQ8VIM6 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm22065-201ENSMUST00000103753 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm22066-201ENSMUST00000103761 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm24932-201ENSMUST00000103763 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm24115-201ENSMUST00000103799 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm22190-201ENSMUST00000103827 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm22191-201ENSMUST00000103831 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm24721-201ENSMUST00000103849 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm28018-201ENSMUST00000103869 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm26399-201ENSMUST00000103937 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Mir449b-201ENSMUST00000104833 80 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm25349-201ENSMUST00000177728 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm23616-201ENSMUST00000177797 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm25871-201ENSMUST00000177816 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm24752-201ENSMUST00000178240 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm24496-201ENSMUST00000178287 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm25649-201ENSMUST00000178476 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm25548-201ENSMUST00000178681 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm23147-201ENSMUST00000178841 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm26095-201ENSMUST00000179270 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm22171-201ENSMUST00000179283 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm23936-201ENSMUST00000179354 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm22619-201ENSMUST00000179516 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm25255-201ENSMUST00000179579 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm24755-201ENSMUST00000179691 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm26506-201ENSMUST00000179692 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm25086-201ENSMUST00000179931 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm23243-201ENSMUST00000180047 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm24659-201ENSMUST00000180212 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm24169-201ENSMUST00000180244 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm23689-201ENSMUST00000180354 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm27359-201ENSMUST00000184153 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm27785-201ENSMUST00000184268 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm27466-201ENSMUST00000184396 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Gm27703-201ENSMUST00000184836 110 ntBASIC19.32■□□□□ 0.68
StrcQ8VIM6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
StrcQ8VIM6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
StrcQ8VIM6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
StrcQ8VIM6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
StrcQ8VIM6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
StrcQ8VIM6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
StrcQ8VIM6 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
StrcQ8VIM6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms