Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim60Q8VI40 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim60Q8VI40 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trim60Q8VI40 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim60Q8VI40 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Trim60Q8VI40 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.86■□□□□ 0.29
Trim60Q8VI40 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim60Q8VI40 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim60Q8VI40 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim60Q8VI40 Gm13474-201ENSMUST00000122466 815 ntBASIC16.86■□□□□ 0.29
Trim60Q8VI40 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim60Q8VI40 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.86■□□□□ 0.29
Trim60Q8VI40 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim60Q8VI40 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim60Q8VI40 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim60Q8VI40 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim60Q8VI40 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim60Q8VI40 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim60Q8VI40 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim60Q8VI40 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.86■□□□□ 0.29
Trim60Q8VI40 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim60Q8VI40 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.86■□□□□ 0.29
Trim60Q8VI40 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Trim60Q8VI40 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim60Q8VI40 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim60Q8VI40 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim60Q8VI40 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim60Q8VI40 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim60Q8VI40 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trim60Q8VI40 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim60Q8VI40 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trim60Q8VI40 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim60Q8VI40 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.85■□□□□ 0.29
Trim60Q8VI40 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim60Q8VI40 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim60Q8VI40 Gm10812-201ENSMUST00000099864 546 ntBASIC16.85■□□□□ 0.29
Trim60Q8VI40 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trim60Q8VI40 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim60Q8VI40 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim60Q8VI40 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim60Q8VI40 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.85■□□□□ 0.29
Trim60Q8VI40 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
Trim60Q8VI40 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.85■□□□□ 0.29
Trim60Q8VI40 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.84■□□□□ 0.29
Trim60Q8VI40 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim60Q8VI40 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim60Q8VI40 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim60Q8VI40 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.84■□□□□ 0.29
Trim60Q8VI40 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim60Q8VI40 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim60Q8VI40 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim60Q8VI40 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.84■□□□□ 0.29
Trim60Q8VI40 Gm44450-201ENSMUST00000199528 114 ntBASIC16.84■□□□□ 0.29
Trim60Q8VI40 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim60Q8VI40 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim60Q8VI40 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim60Q8VI40 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim60Q8VI40 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim60Q8VI40 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim60Q8VI40 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim60Q8VI40 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim60Q8VI40 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.84■□□□□ 0.29
Trim60Q8VI40 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim60Q8VI40 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim60Q8VI40 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim60Q8VI40 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim60Q8VI40 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim60Q8VI40 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.83■□□□□ 0.28
Trim60Q8VI40 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim60Q8VI40 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim60Q8VI40 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.83■□□□□ 0.28
Trim60Q8VI40 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim60Q8VI40 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim60Q8VI40 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim60Q8VI40 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim60Q8VI40 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim60Q8VI40 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim60Q8VI40 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim60Q8VI40 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim60Q8VI40 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trim60Q8VI40 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim60Q8VI40 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim60Q8VI40 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim60Q8VI40 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim60Q8VI40 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim60Q8VI40 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim60Q8VI40 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Gm16061-201ENSMUST00000122167 857 ntBASIC16.82■□□□□ 0.28
Trim60Q8VI40 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim60Q8VI40 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim60Q8VI40 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms