Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cspg4Q8VHY0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cspg4Q8VHY0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Grk6-207ENSMUST00000225925 2769 ntBASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Gm12428-201ENSMUST00000119844 727 ntBASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Gm25857-201ENSMUST00000082788 129 ntBASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cspg4Q8VHY0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Gm10616-201ENSMUST00000205285 2127 ntBASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Gm5866-201ENSMUST00000177881 973 ntBASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cspg4Q8VHY0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cspg4Q8VHY0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms