Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps4aQ8VEJ9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps4aQ8VEJ9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps4aQ8VEJ9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.82■□□□□ 0.12
Vps4aQ8VEJ9 Gm18958-201ENSMUST00000174258 762 ntBASIC15.82■□□□□ 0.12
Vps4aQ8VEJ9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.82■□□□□ 0.12
Vps4aQ8VEJ9 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.82■□□□□ 0.12
Vps4aQ8VEJ9 Il3ra-202ENSMUST00000223589 738 ntBASIC15.82■□□□□ 0.12
Vps4aQ8VEJ9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps4aQ8VEJ9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vps4aQ8VEJ9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Vps4aQ8VEJ9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Vps4aQ8VEJ9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps4aQ8VEJ9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps4aQ8VEJ9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Vps4aQ8VEJ9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps4aQ8VEJ9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps4aQ8VEJ9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps4aQ8VEJ9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps4aQ8VEJ9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Vps4aQ8VEJ9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps4aQ8VEJ9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps4aQ8VEJ9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps4aQ8VEJ9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps4aQ8VEJ9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps4aQ8VEJ9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps4aQ8VEJ9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps4aQ8VEJ9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps4aQ8VEJ9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Vps4aQ8VEJ9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps4aQ8VEJ9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Vps4aQ8VEJ9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps4aQ8VEJ9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.81■□□□□ 0.12
Vps4aQ8VEJ9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.81■□□□□ 0.12
Vps4aQ8VEJ9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps4aQ8VEJ9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps4aQ8VEJ9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Vps4aQ8VEJ9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps4aQ8VEJ9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps4aQ8VEJ9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Gm27704-201ENSMUST00000185094 107 ntBASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps4aQ8VEJ9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Vps4aQ8VEJ9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4aQ8VEJ9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Vps4aQ8VEJ9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4aQ8VEJ9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4aQ8VEJ9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4aQ8VEJ9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Vps4aQ8VEJ9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4aQ8VEJ9 Gm16061-201ENSMUST00000122167 857 ntBASIC15.79■□□□□ 0.12
Vps4aQ8VEJ9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.79■□□□□ 0.12
Vps4aQ8VEJ9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4aQ8VEJ9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.79■□□□□ 0.12
Vps4aQ8VEJ9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Vps4aQ8VEJ9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4aQ8VEJ9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4aQ8VEJ9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4aQ8VEJ9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Vps4aQ8VEJ9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4aQ8VEJ9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4aQ8VEJ9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps4aQ8VEJ9 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.79■□□□□ 0.12
Vps4aQ8VEJ9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4aQ8VEJ9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4aQ8VEJ9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.78■□□□□ 0.12
Vps4aQ8VEJ9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4aQ8VEJ9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Vps4aQ8VEJ9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4aQ8VEJ9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4aQ8VEJ9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4aQ8VEJ9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4aQ8VEJ9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Vps4aQ8VEJ9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.78■□□□□ 0.12
Vps4aQ8VEJ9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms