Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3kbp1Q8R550 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sh3kbp1Q8R550 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3kbp1Q8R550 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Sh3kbp1Q8R550 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3kbp1Q8R550 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3kbp1Q8R550 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3kbp1Q8R550 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3kbp1Q8R550 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Sh3kbp1Q8R550 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3kbp1Q8R550 Gm34391-201ENSMUST00000203706 907 ntBASIC16.78■□□□□ 0.28
Sh3kbp1Q8R550 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3kbp1Q8R550 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3kbp1Q8R550 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Sh3kbp1Q8R550 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.78■□□□□ 0.28
Sh3kbp1Q8R550 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3kbp1Q8R550 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3kbp1Q8R550 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3kbp1Q8R550 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.78■□□□□ 0.28
Sh3kbp1Q8R550 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3kbp1Q8R550 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3kbp1Q8R550 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh3kbp1Q8R550 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3kbp1Q8R550 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Sh3kbp1Q8R550 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3kbp1Q8R550 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3kbp1Q8R550 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3kbp1Q8R550 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3kbp1Q8R550 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Sh3kbp1Q8R550 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3kbp1Q8R550 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3kbp1Q8R550 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Sh3kbp1Q8R550 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3kbp1Q8R550 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
Sh3kbp1Q8R550 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3kbp1Q8R550 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.77■□□□□ 0.28
Sh3kbp1Q8R550 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.77■□□□□ 0.28
Sh3kbp1Q8R550 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3kbp1Q8R550 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.77■□□□□ 0.28
Sh3kbp1Q8R550 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh3kbp1Q8R550 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sh3kbp1Q8R550 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Sh3kbp1Q8R550 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sh3kbp1Q8R550 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sh3kbp1Q8R550 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sh3kbp1Q8R550 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Sh3kbp1Q8R550 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Sh3kbp1Q8R550 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3kbp1Q8R550 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3kbp1Q8R550 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3kbp1Q8R550 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sh3kbp1Q8R550 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.76■□□□□ 0.27
Sh3kbp1Q8R550 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.76■□□□□ 0.27
Sh3kbp1Q8R550 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Sh3kbp1Q8R550 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sh3kbp1Q8R550 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Sh3kbp1Q8R550 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.76■□□□□ 0.27
Sh3kbp1Q8R550 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Sh3kbp1Q8R550 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Sh3kbp1Q8R550 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Sh3kbp1Q8R550 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.76■□□□□ 0.27
Sh3kbp1Q8R550 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3kbp1Q8R550 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3kbp1Q8R550 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sh3kbp1Q8R550 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3kbp1Q8R550 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3kbp1Q8R550 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3kbp1Q8R550 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sh3kbp1Q8R550 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sh3kbp1Q8R550 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3kbp1Q8R550 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3kbp1Q8R550 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3kbp1Q8R550 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3kbp1Q8R550 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3kbp1Q8R550 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3kbp1Q8R550 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.75■□□□□ 0.27
Sh3kbp1Q8R550 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3kbp1Q8R550 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3kbp1Q8R550 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3kbp1Q8R550 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.75■□□□□ 0.27
Sh3kbp1Q8R550 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.75■□□□□ 0.27
Sh3kbp1Q8R550 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.75■□□□□ 0.27
Sh3kbp1Q8R550 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3kbp1Q8R550 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3kbp1Q8R550 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3kbp1Q8R550 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3kbp1Q8R550 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sh3kbp1Q8R550 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms