Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim29Q8R2Q0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim29Q8R2Q0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim29Q8R2Q0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim29Q8R2Q0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim29Q8R2Q0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Trim29Q8R2Q0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim29Q8R2Q0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim29Q8R2Q0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.63■□□□□ 0.57
Trim29Q8R2Q0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim29Q8R2Q0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim29Q8R2Q0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim29Q8R2Q0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim29Q8R2Q0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim29Q8R2Q0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim29Q8R2Q0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim29Q8R2Q0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.63■□□□□ 0.57
Trim29Q8R2Q0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Trim29Q8R2Q0 Gm37722-201ENSMUST00000193757 208 ntBASIC18.63■□□□□ 0.57
Trim29Q8R2Q0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.63■□□□□ 0.57
Trim29Q8R2Q0 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.63■□□□□ 0.57
Trim29Q8R2Q0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim29Q8R2Q0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim29Q8R2Q0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim29Q8R2Q0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim29Q8R2Q0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim29Q8R2Q0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim29Q8R2Q0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim29Q8R2Q0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim29Q8R2Q0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.62■□□□□ 0.57
Trim29Q8R2Q0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim29Q8R2Q0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.62■□□□□ 0.57
Trim29Q8R2Q0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Trim29Q8R2Q0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.62■□□□□ 0.57
Trim29Q8R2Q0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim29Q8R2Q0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim29Q8R2Q0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim29Q8R2Q0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim29Q8R2Q0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.62■□□□□ 0.57
Trim29Q8R2Q0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim29Q8R2Q0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trim29Q8R2Q0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim29Q8R2Q0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim29Q8R2Q0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim29Q8R2Q0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim29Q8R2Q0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Gm10231-201ENSMUST00000181584 441 ntBASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Gm10175-202ENSMUST00000208752 441 ntBASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim29Q8R2Q0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim29Q8R2Q0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim29Q8R2Q0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim29Q8R2Q0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim29Q8R2Q0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim29Q8R2Q0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim29Q8R2Q0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim29Q8R2Q0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim29Q8R2Q0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trim29Q8R2Q0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.6■□□□□ 0.57
Trim29Q8R2Q0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Trim29Q8R2Q0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim29Q8R2Q0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim29Q8R2Q0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim29Q8R2Q0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim29Q8R2Q0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Trim29Q8R2Q0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim29Q8R2Q0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim29Q8R2Q0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim29Q8R2Q0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Trim29Q8R2Q0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trim29Q8R2Q0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim29Q8R2Q0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim29Q8R2Q0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.59■□□□□ 0.57
Trim29Q8R2Q0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.59■□□□□ 0.57
Trim29Q8R2Q0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.59■□□□□ 0.57
Trim29Q8R2Q0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim29Q8R2Q0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.59■□□□□ 0.57
Trim29Q8R2Q0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim29Q8R2Q0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms