Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 Gm5264-201ENSMUST00000190584 848 ntBASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Vopp1Q8R1C3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Vopp1Q8R1C3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Gm14140-201ENSMUST00000119999 995 ntBASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vopp1Q8R1C3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vopp1Q8R1C3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vopp1Q8R1C3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vopp1Q8R1C3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vopp1Q8R1C3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vopp1Q8R1C3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vopp1Q8R1C3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Vopp1Q8R1C3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vopp1Q8R1C3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vopp1Q8R1C3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vopp1Q8R1C3 Gm7222-201ENSMUST00000117512 906 ntBASIC17.19■□□□□ 0.34
Vopp1Q8R1C3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.19■□□□□ 0.34
Vopp1Q8R1C3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.19■□□□□ 0.34
Vopp1Q8R1C3 Gm8000-201ENSMUST00000188378 592 ntBASIC17.19■□□□□ 0.34
Vopp1Q8R1C3 Gm37935-201ENSMUST00000192012 982 ntBASIC17.19■□□□□ 0.34
Vopp1Q8R1C3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.19■□□□□ 0.34
Vopp1Q8R1C3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vopp1Q8R1C3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vopp1Q8R1C3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vopp1Q8R1C3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.19■□□□□ 0.34
Vopp1Q8R1C3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vopp1Q8R1C3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vopp1Q8R1C3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vopp1Q8R1C3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vopp1Q8R1C3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Vopp1Q8R1C3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Vopp1Q8R1C3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vopp1Q8R1C3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Vopp1Q8R1C3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vopp1Q8R1C3 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.18■□□□□ 0.34
Vopp1Q8R1C3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.18■□□□□ 0.34
Vopp1Q8R1C3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.18■□□□□ 0.34
Vopp1Q8R1C3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vopp1Q8R1C3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Vopp1Q8R1C3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vopp1Q8R1C3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vopp1Q8R1C3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.18■□□□□ 0.34
Vopp1Q8R1C3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vopp1Q8R1C3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Vopp1Q8R1C3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Vopp1Q8R1C3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vopp1Q8R1C3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vopp1Q8R1C3 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.17■□□□□ 0.34
Vopp1Q8R1C3 Gm14494-201ENSMUST00000118786 435 ntBASIC17.17■□□□□ 0.34
Vopp1Q8R1C3 Gm15467-201ENSMUST00000120582 445 ntBASIC17.17■□□□□ 0.34
Vopp1Q8R1C3 Gm11594-201ENSMUST00000122313 162 ntBASIC17.17■□□□□ 0.34
Vopp1Q8R1C3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vopp1Q8R1C3 Gm9727-201ENSMUST00000161387 555 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms