Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cchcr1Q8K2I2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cchcr1Q8K2I2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.28■□□□□ 0.68
Cchcr1Q8K2I2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cchcr1Q8K2I2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Cchcr1Q8K2I2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cchcr1Q8K2I2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cchcr1Q8K2I2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cchcr1Q8K2I2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cchcr1Q8K2I2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cchcr1Q8K2I2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cchcr1Q8K2I2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cchcr1Q8K2I2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cchcr1Q8K2I2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cchcr1Q8K2I2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cchcr1Q8K2I2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cchcr1Q8K2I2 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.27■□□□□ 0.68
Cchcr1Q8K2I2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cchcr1Q8K2I2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cchcr1Q8K2I2 Gm45058-201ENSMUST00000205810 766 ntBASIC19.27■□□□□ 0.68
Cchcr1Q8K2I2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cchcr1Q8K2I2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cchcr1Q8K2I2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cchcr1Q8K2I2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cchcr1Q8K2I2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cchcr1Q8K2I2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Cchcr1Q8K2I2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cchcr1Q8K2I2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cchcr1Q8K2I2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cchcr1Q8K2I2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cchcr1Q8K2I2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Cchcr1Q8K2I2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cchcr1Q8K2I2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cchcr1Q8K2I2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cchcr1Q8K2I2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cchcr1Q8K2I2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cchcr1Q8K2I2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cchcr1Q8K2I2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cchcr1Q8K2I2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.26■□□□□ 0.67
Cchcr1Q8K2I2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cchcr1Q8K2I2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cchcr1Q8K2I2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cchcr1Q8K2I2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.26■□□□□ 0.67
Cchcr1Q8K2I2 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.26■□□□□ 0.67
Cchcr1Q8K2I2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cchcr1Q8K2I2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cchcr1Q8K2I2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.26■□□□□ 0.67
Cchcr1Q8K2I2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cchcr1Q8K2I2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cchcr1Q8K2I2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cchcr1Q8K2I2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cchcr1Q8K2I2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cchcr1Q8K2I2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cchcr1Q8K2I2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.26■□□□□ 0.67
Cchcr1Q8K2I2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cchcr1Q8K2I2 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.25■□□□□ 0.67
Cchcr1Q8K2I2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cchcr1Q8K2I2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cchcr1Q8K2I2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cchcr1Q8K2I2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cchcr1Q8K2I2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cchcr1Q8K2I2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cchcr1Q8K2I2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cchcr1Q8K2I2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cchcr1Q8K2I2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.25■□□□□ 0.67
Cchcr1Q8K2I2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.25■□□□□ 0.67
Cchcr1Q8K2I2 Gm18959-201ENSMUST00000208954 655 ntBASIC19.25■□□□□ 0.67
Cchcr1Q8K2I2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cchcr1Q8K2I2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cchcr1Q8K2I2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cchcr1Q8K2I2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.25■□□□□ 0.67
Cchcr1Q8K2I2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cchcr1Q8K2I2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cchcr1Q8K2I2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cchcr1Q8K2I2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Cchcr1Q8K2I2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms