Protein–RNA interactions for Protein: Q8K2F3

Depp1, Protein DEPP1, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depp1Q8K2F3 Gm18115-201ENSMUST00000221209 621 ntBASIC13.96□□□□□ -0.17
Depp1Q8K2F3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Depp1Q8K2F3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Depp1Q8K2F3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Depp1Q8K2F3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Depp1Q8K2F3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.96□□□□□ -0.18
Depp1Q8K2F3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Depp1Q8K2F3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Depp1Q8K2F3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Depp1Q8K2F3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Depp1Q8K2F3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.95□□□□□ -0.18
Depp1Q8K2F3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Gm44450-201ENSMUST00000199528 114 ntBASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Depp1Q8K2F3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depp1Q8K2F3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depp1Q8K2F3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depp1Q8K2F3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Depp1Q8K2F3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depp1Q8K2F3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depp1Q8K2F3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Depp1Q8K2F3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depp1Q8K2F3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depp1Q8K2F3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depp1Q8K2F3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Depp1Q8K2F3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Depp1Q8K2F3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Depp1Q8K2F3 Gm30025-201ENSMUST00000218555 728 ntBASIC13.94□□□□□ -0.18
Depp1Q8K2F3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depp1Q8K2F3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Depp1Q8K2F3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Depp1Q8K2F3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depp1Q8K2F3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depp1Q8K2F3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depp1Q8K2F3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depp1Q8K2F3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Depp1Q8K2F3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.93□□□□□ -0.18
Depp1Q8K2F3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Gm10566-201ENSMUST00000086739 996 ntBASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Depp1Q8K2F3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.93□□□□□ -0.18
Depp1Q8K2F3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms