Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smc4Q8CG47 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc4Q8CG47 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc4Q8CG47 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.02■□□□□ 0.8
Smc4Q8CG47 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Smc4Q8CG47 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Smc4Q8CG47 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc4Q8CG47 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Smc4Q8CG47 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC20.02■□□□□ 0.8
Smc4Q8CG47 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc4Q8CG47 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.02■□□□□ 0.8
Smc4Q8CG47 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc4Q8CG47 Gm13884-201ENSMUST00000118103 829 ntBASIC20.02■□□□□ 0.8
Smc4Q8CG47 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smc4Q8CG47 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc4Q8CG47 Gm25745-201ENSMUST00000174945 133 ntBASIC20.02■□□□□ 0.8
Smc4Q8CG47 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.02■□□□□ 0.8
Smc4Q8CG47 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc4Q8CG47 Rps4l-201ENSMUST00000071745 943 ntBASIC20.02■□□□□ 0.8
Smc4Q8CG47 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Smc4Q8CG47 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smc4Q8CG47 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Smc4Q8CG47 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc4Q8CG47 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC20.02■□□□□ 0.8
Smc4Q8CG47 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc4Q8CG47 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smc4Q8CG47 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Smc4Q8CG47 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smc4Q8CG47 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smc4Q8CG47 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.02■□□□□ 0.79
Smc4Q8CG47 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.02■□□□□ 0.79
Smc4Q8CG47 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smc4Q8CG47 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smc4Q8CG47 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc4Q8CG47 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc4Q8CG47 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc4Q8CG47 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Smc4Q8CG47 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc4Q8CG47 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smc4Q8CG47 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
Smc4Q8CG47 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Smc4Q8CG47 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc4Q8CG47 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC20.01■□□□□ 0.79
Smc4Q8CG47 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc4Q8CG47 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smc4Q8CG47 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.01■□□□□ 0.79
Smc4Q8CG47 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC20.01■□□□□ 0.79
Smc4Q8CG47 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.01■□□□□ 0.79
Smc4Q8CG47 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc4Q8CG47 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Smc4Q8CG47 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc4Q8CG47 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc4Q8CG47 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc4Q8CG47 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smc4Q8CG47 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Smc4Q8CG47 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Smc4Q8CG47 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Smc4Q8CG47 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20■□□□□ 0.79
Smc4Q8CG47 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Smc4Q8CG47 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Smc4Q8CG47 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc4Q8CG47 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc4Q8CG47 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc4Q8CG47 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc4Q8CG47 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Smc4Q8CG47 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc4Q8CG47 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smc4Q8CG47 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc4Q8CG47 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc4Q8CG47 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc4Q8CG47 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc4Q8CG47 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Smc4Q8CG47 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc4Q8CG47 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc4Q8CG47 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Smc4Q8CG47 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.99■□□□□ 0.79
Smc4Q8CG47 Gm18195-201ENSMUST00000207604 706 ntBASIC19.99■□□□□ 0.79
Smc4Q8CG47 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc4Q8CG47 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc4Q8CG47 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smc4Q8CG47 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smc4Q8CG47 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smc4Q8CG47 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smc4Q8CG47 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Smc4Q8CG47 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc4Q8CG47 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Smc4Q8CG47 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc4Q8CG47 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Smc4Q8CG47 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Smc4Q8CG47 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.98■□□□□ 0.79
Smc4Q8CG47 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc4Q8CG47 Gm11452-201ENSMUST00000122376 690 ntBASIC19.98■□□□□ 0.79
Smc4Q8CG47 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.98■□□□□ 0.79
Smc4Q8CG47 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc4Q8CG47 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc4Q8CG47 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smc4Q8CG47 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Smc4Q8CG47 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc4Q8CG47 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smc4Q8CG47 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms