Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 Gm7213-201ENSMUST00000215977 950 ntBASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb7Q8CDY9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb7Q8CDY9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdhb7Q8CDY9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb7Q8CDY9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb7Q8CDY9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb7Q8CDY9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb7Q8CDY9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb7Q8CDY9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.38■□□□□ 0.21
Pcdhb7Q8CDY9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb7Q8CDY9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb7Q8CDY9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb7Q8CDY9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb7Q8CDY9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb7Q8CDY9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb7Q8CDY9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb7Q8CDY9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb7Q8CDY9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb7Q8CDY9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb7Q8CDY9 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.38■□□□□ 0.21
Pcdhb7Q8CDY9 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.38■□□□□ 0.21
Pcdhb7Q8CDY9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdhb7Q8CDY9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb7Q8CDY9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Gm45058-201ENSMUST00000205810 766 ntBASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb7Q8CDY9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb7Q8CDY9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb7Q8CDY9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb7Q8CDY9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb7Q8CDY9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb7Q8CDY9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb7Q8CDY9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb7Q8CDY9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb7Q8CDY9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb7Q8CDY9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb7Q8CDY9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb7Q8CDY9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb7Q8CDY9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb7Q8CDY9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb7Q8CDY9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.36■□□□□ 0.21
Pcdhb7Q8CDY9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb7Q8CDY9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb7Q8CDY9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb7Q8CDY9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb7Q8CDY9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb7Q8CDY9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb7Q8CDY9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb7Q8CDY9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb7Q8CDY9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb7Q8CDY9 Gm13186-201ENSMUST00000118031 316 ntBASIC16.35■□□□□ 0.21
Pcdhb7Q8CDY9 Gm6433-201ENSMUST00000118634 875 ntBASIC16.35■□□□□ 0.21
Pcdhb7Q8CDY9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb7Q8CDY9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Pcdhb7Q8CDY9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhb7Q8CDY9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb7Q8CDY9 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.35■□□□□ 0.21
Pcdhb7Q8CDY9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb7Q8CDY9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhb7Q8CDY9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb7Q8CDY9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb7Q8CDY9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms