Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Fam228aQ8CDW1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam228aQ8CDW1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam228aQ8CDW1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Fam228aQ8CDW1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Fam228aQ8CDW1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam228aQ8CDW1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam228aQ8CDW1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Fam228aQ8CDW1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Fam228aQ8CDW1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam228aQ8CDW1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam228aQ8CDW1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.13■□□□□ 0.33
Fam228aQ8CDW1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam228aQ8CDW1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Fam228aQ8CDW1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Fam228aQ8CDW1 Gm12527-201ENSMUST00000117967 564 ntBASIC17.13■□□□□ 0.33
Fam228aQ8CDW1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Fam228aQ8CDW1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Fam228aQ8CDW1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.13■□□□□ 0.33
Fam228aQ8CDW1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.13■□□□□ 0.33
Fam228aQ8CDW1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam228aQ8CDW1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam228aQ8CDW1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Fam228aQ8CDW1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam228aQ8CDW1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam228aQ8CDW1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam228aQ8CDW1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam228aQ8CDW1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam228aQ8CDW1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fam228aQ8CDW1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Fam228aQ8CDW1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam228aQ8CDW1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Fam228aQ8CDW1 Actl10-202ENSMUST00000226583 1501 ntBASIC17.12■□□□□ 0.33
Fam228aQ8CDW1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Fam228aQ8CDW1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam228aQ8CDW1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam228aQ8CDW1 Gm7791-201ENSMUST00000219066 539 ntBASIC17.12■□□□□ 0.33
Fam228aQ8CDW1 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.12■□□□□ 0.33
Fam228aQ8CDW1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam228aQ8CDW1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam228aQ8CDW1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam228aQ8CDW1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam228aQ8CDW1 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.12■□□□□ 0.33
Fam228aQ8CDW1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam228aQ8CDW1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fam228aQ8CDW1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fam228aQ8CDW1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fam228aQ8CDW1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fam228aQ8CDW1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Fam228aQ8CDW1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fam228aQ8CDW1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fam228aQ8CDW1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms