Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Vcpip1Q8CDG3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vcpip1Q8CDG3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Vcpip1Q8CDG3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vcpip1Q8CDG3 Actl10-202ENSMUST00000226583 1501 ntBASIC17.52■□□□□ 0.39
Vcpip1Q8CDG3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vcpip1Q8CDG3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Vcpip1Q8CDG3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vcpip1Q8CDG3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Gm13436-201ENSMUST00000120418 567 ntBASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcpip1Q8CDG3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Vcpip1Q8CDG3 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.5■□□□□ 0.39
Vcpip1Q8CDG3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Vcpip1Q8CDG3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vcpip1Q8CDG3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcpip1Q8CDG3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcpip1Q8CDG3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vcpip1Q8CDG3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vcpip1Q8CDG3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcpip1Q8CDG3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcpip1Q8CDG3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcpip1Q8CDG3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vcpip1Q8CDG3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.5■□□□□ 0.39
Vcpip1Q8CDG3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcpip1Q8CDG3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcpip1Q8CDG3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcpip1Q8CDG3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcpip1Q8CDG3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcpip1Q8CDG3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcpip1Q8CDG3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcpip1Q8CDG3 Phf7-203ENSMUST00000226565 1971 ntBASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Gm13559-201ENSMUST00000120476 863 ntBASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vcpip1Q8CDG3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcpip1Q8CDG3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcpip1Q8CDG3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcpip1Q8CDG3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcpip1Q8CDG3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcpip1Q8CDG3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcpip1Q8CDG3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcpip1Q8CDG3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcpip1Q8CDG3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcpip1Q8CDG3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vcpip1Q8CDG3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.48■□□□□ 0.39
Vcpip1Q8CDG3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Vcpip1Q8CDG3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Vcpip1Q8CDG3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vcpip1Q8CDG3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.48■□□□□ 0.39
Vcpip1Q8CDG3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms