Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Slc46a2Q8CA03 Gm10812-201ENSMUST00000099864 546 ntBASIC15.68■□□□□ 0.1
Slc46a2Q8CA03 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Slc46a2Q8CA03 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Slc46a2Q8CA03 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc46a2Q8CA03 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.68■□□□□ 0.1
Slc46a2Q8CA03 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc46a2Q8CA03 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Slc46a2Q8CA03 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Slc46a2Q8CA03 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc46a2Q8CA03 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc46a2Q8CA03 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc46a2Q8CA03 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.68■□□□□ 0.1
Slc46a2Q8CA03 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc46a2Q8CA03 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc46a2Q8CA03 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.65■□□□□ 0.1
Slc46a2Q8CA03 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms