Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Gm27867-201ENSMUST00000184778 125 ntBASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Alx1Q8C8B0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Gm25406-201ENSMUST00000157599 105 ntBASIC18.98■□□□□ 0.63
Alx1Q8C8B0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Alx1Q8C8B0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Alx1Q8C8B0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Alx1Q8C8B0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Alx1Q8C8B0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Alx1Q8C8B0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Alx1Q8C8B0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.97■□□□□ 0.63
Alx1Q8C8B0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.97■□□□□ 0.63
Alx1Q8C8B0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Alx1Q8C8B0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Alx1Q8C8B0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.97■□□□□ 0.63
Alx1Q8C8B0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Alx1Q8C8B0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Alx1Q8C8B0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Alx1Q8C8B0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Alx1Q8C8B0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Alx1Q8C8B0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Alx1Q8C8B0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Alx1Q8C8B0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.97■□□□□ 0.63
Alx1Q8C8B0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Alx1Q8C8B0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Alx1Q8C8B0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.97■□□□□ 0.63
Alx1Q8C8B0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Alx1Q8C8B0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Alx1Q8C8B0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Alx1Q8C8B0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Alx1Q8C8B0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Alx1Q8C8B0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Alx1Q8C8B0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.96■□□□□ 0.63
Alx1Q8C8B0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Alx1Q8C8B0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Alx1Q8C8B0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.96■□□□□ 0.63
Alx1Q8C8B0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.96■□□□□ 0.63
Alx1Q8C8B0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Alx1Q8C8B0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Alx1Q8C8B0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Alx1Q8C8B0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Alx1Q8C8B0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.95■□□□□ 0.62
Alx1Q8C8B0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Alx1Q8C8B0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Alx1Q8C8B0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Alx1Q8C8B0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Alx1Q8C8B0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.95■□□□□ 0.62
Alx1Q8C8B0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.95■□□□□ 0.62
Alx1Q8C8B0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Alx1Q8C8B0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms