Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Uba3Q8C878 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Uba3Q8C878 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Uba3Q8C878 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.16■□□□□ 0.34
Uba3Q8C878 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.16■□□□□ 0.34
Uba3Q8C878 Gm36967-201ENSMUST00000193814 266 ntBASIC17.16■□□□□ 0.34
Uba3Q8C878 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Uba3Q8C878 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Uba3Q8C878 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Uba3Q8C878 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Uba3Q8C878 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Uba3Q8C878 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.16■□□□□ 0.34
Uba3Q8C878 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Uba3Q8C878 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Uba3Q8C878 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Uba3Q8C878 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Uba3Q8C878 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.15■□□□□ 0.34
Uba3Q8C878 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Uba3Q8C878 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Uba3Q8C878 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Uba3Q8C878 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.15■□□□□ 0.34
Uba3Q8C878 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Uba3Q8C878 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Uba3Q8C878 Gm14859-201ENSMUST00000117752 357 ntBASIC17.15■□□□□ 0.34
Uba3Q8C878 Gm27742-201ENSMUST00000184667 60 ntBASIC17.15■□□□□ 0.34
Uba3Q8C878 Gm21362-201ENSMUST00000194272 928 ntBASIC17.15■□□□□ 0.34
Uba3Q8C878 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.15■□□□□ 0.34
Uba3Q8C878 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Uba3Q8C878 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Uba3Q8C878 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Uba3Q8C878 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Uba3Q8C878 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.15■□□□□ 0.34
Uba3Q8C878 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Uba3Q8C878 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.15■□□□□ 0.34
Uba3Q8C878 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Uba3Q8C878 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Uba3Q8C878 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Uba3Q8C878 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Uba3Q8C878 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Uba3Q8C878 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba3Q8C878 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba3Q8C878 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba3Q8C878 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba3Q8C878 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Uba3Q8C878 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba3Q8C878 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba3Q8C878 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba3Q8C878 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Uba3Q8C878 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba3Q8C878 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Uba3Q8C878 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.14■□□□□ 0.33
Uba3Q8C878 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba3Q8C878 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba3Q8C878 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba3Q8C878 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Uba3Q8C878 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba3Q8C878 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba3Q8C878 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba3Q8C878 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Uba3Q8C878 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba3Q8C878 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba3Q8C878 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Uba3Q8C878 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba3Q8C878 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Uba3Q8C878 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uba3Q8C878 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Uba3Q8C878 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uba3Q8C878 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uba3Q8C878 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Uba3Q8C878 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Uba3Q8C878 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.13■□□□□ 0.33
Uba3Q8C878 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Uba3Q8C878 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uba3Q8C878 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uba3Q8C878 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uba3Q8C878 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uba3Q8C878 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.13■□□□□ 0.33
Uba3Q8C878 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Uba3Q8C878 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Uba3Q8C878 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Uba3Q8C878 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.13■□□□□ 0.33
Uba3Q8C878 Gm44430-201ENSMUST00000203376 995 ntBASIC17.13■□□□□ 0.33
Uba3Q8C878 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Uba3Q8C878 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uba3Q8C878 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Uba3Q8C878 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uba3Q8C878 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uba3Q8C878 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Uba3Q8C878 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uba3Q8C878 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uba3Q8C878 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Uba3Q8C878 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Uba3Q8C878 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Uba3Q8C878 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Uba3Q8C878 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba3Q8C878 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba3Q8C878 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba3Q8C878 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba3Q8C878 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Uba3Q8C878 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms