Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Usp44Q8C2S0 Gm7284-201ENSMUST00000131667 944 ntBASIC19.08■□□□□ 0.64
Usp44Q8C2S0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Usp44Q8C2S0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Usp44Q8C2S0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Usp44Q8C2S0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.08■□□□□ 0.64
Usp44Q8C2S0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Usp44Q8C2S0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp44Q8C2S0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.08■□□□□ 0.64
Usp44Q8C2S0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp44Q8C2S0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Usp44Q8C2S0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp44Q8C2S0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.07■□□□□ 0.64
Usp44Q8C2S0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
Usp44Q8C2S0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp44Q8C2S0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp44Q8C2S0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp44Q8C2S0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp44Q8C2S0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.07■□□□□ 0.64
Usp44Q8C2S0 Gm13312-201ENSMUST00000119631 718 ntBASIC19.07■□□□□ 0.64
Usp44Q8C2S0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Usp44Q8C2S0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.07■□□□□ 0.64
Usp44Q8C2S0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.07■□□□□ 0.64
Usp44Q8C2S0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Usp44Q8C2S0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp44Q8C2S0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp44Q8C2S0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp44Q8C2S0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp44Q8C2S0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp44Q8C2S0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp44Q8C2S0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp44Q8C2S0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp44Q8C2S0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp44Q8C2S0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp44Q8C2S0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.06■□□□□ 0.64
Usp44Q8C2S0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.06■□□□□ 0.64
Usp44Q8C2S0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.06■□□□□ 0.64
Usp44Q8C2S0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.06■□□□□ 0.64
Usp44Q8C2S0 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.06■□□□□ 0.64
Usp44Q8C2S0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp44Q8C2S0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp44Q8C2S0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp44Q8C2S0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp44Q8C2S0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp44Q8C2S0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp44Q8C2S0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Usp44Q8C2S0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp44Q8C2S0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp44Q8C2S0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp44Q8C2S0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp44Q8C2S0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp44Q8C2S0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp44Q8C2S0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.05■□□□□ 0.64
Usp44Q8C2S0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp44Q8C2S0 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.05■□□□□ 0.64
Usp44Q8C2S0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.05■□□□□ 0.64
Usp44Q8C2S0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp44Q8C2S0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp44Q8C2S0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp44Q8C2S0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp44Q8C2S0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp44Q8C2S0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp44Q8C2S0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp44Q8C2S0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp44Q8C2S0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp44Q8C2S0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp44Q8C2S0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp44Q8C2S0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Usp44Q8C2S0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.03■□□□□ 0.64
Usp44Q8C2S0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp44Q8C2S0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp44Q8C2S0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.03■□□□□ 0.64
Usp44Q8C2S0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Usp44Q8C2S0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.03■□□□□ 0.64
Usp44Q8C2S0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.03■□□□□ 0.64
Usp44Q8C2S0 Mir3081-201ENSMUST00000175305 84 ntBASIC19.03■□□□□ 0.64
Usp44Q8C2S0 Mir6404-201ENSMUST00000183699 94 ntBASIC19.03■□□□□ 0.64
Usp44Q8C2S0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms