Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ptcd1Q8C2E4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.02■□□□□ 0.79
Ptcd1Q8C2E4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ptcd1Q8C2E4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ptcd1Q8C2E4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ptcd1Q8C2E4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ptcd1Q8C2E4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ptcd1Q8C2E4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ptcd1Q8C2E4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ptcd1Q8C2E4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20■□□□□ 0.79
Ptcd1Q8C2E4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ptcd1Q8C2E4 Gm45203-201ENSMUST00000206384 1831 ntBASIC20■□□□□ 0.79
Ptcd1Q8C2E4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ptcd1Q8C2E4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20■□□□□ 0.79
Ptcd1Q8C2E4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ptcd1Q8C2E4 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC20■□□□□ 0.79
Ptcd1Q8C2E4 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ptcd1Q8C2E4 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC20■□□□□ 0.79
Ptcd1Q8C2E4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ptcd1Q8C2E4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
Ptcd1Q8C2E4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Ptcd1Q8C2E4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ptcd1Q8C2E4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ptcd1Q8C2E4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ptcd1Q8C2E4 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.99■□□□□ 0.79
Ptcd1Q8C2E4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Ptcd1Q8C2E4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ptcd1Q8C2E4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ptcd1Q8C2E4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ptcd1Q8C2E4 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ptcd1Q8C2E4 Auts2-212ENSMUST00000178555 309 ntBASIC19.99■□□□□ 0.79
Ptcd1Q8C2E4 Gm6550-201ENSMUST00000187574 993 ntBASIC19.99■□□□□ 0.79
Ptcd1Q8C2E4 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.99■□□□□ 0.79
Ptcd1Q8C2E4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ptcd1Q8C2E4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ptcd1Q8C2E4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ptcd1Q8C2E4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ptcd1Q8C2E4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.99■□□□□ 0.79
Ptcd1Q8C2E4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ptcd1Q8C2E4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ptcd1Q8C2E4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ptcd1Q8C2E4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ptcd1Q8C2E4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 Gm45683-201ENSMUST00000210825 1247 ntBASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ptcd1Q8C2E4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptcd1Q8C2E4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptcd1Q8C2E4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.97■□□□□ 0.79
Ptcd1Q8C2E4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptcd1Q8C2E4 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Ptcd1Q8C2E4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptcd1Q8C2E4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ptcd1Q8C2E4 Gm26308-201ENSMUST00000157768 69 ntBASIC19.97■□□□□ 0.79
Ptcd1Q8C2E4 Gm27628-201ENSMUST00000184911 107 ntBASIC19.97■□□□□ 0.79
Ptcd1Q8C2E4 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC19.97■□□□□ 0.79
Ptcd1Q8C2E4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ptcd1Q8C2E4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms