Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Prob1-201ENSMUST00000097619 3021 ntBASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdhr3Q8BL00 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdhr3Q8BL00 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Gm18115-201ENSMUST00000221209 621 ntBASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Cdhr3Q8BL00 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Cdhr3Q8BL00 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Cdhr3Q8BL00 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.21□□□□□ -0.13
Cdhr3Q8BL00 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdhr3Q8BL00 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdhr3Q8BL00 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdhr3Q8BL00 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdhr3Q8BL00 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.21□□□□□ -0.13
Cdhr3Q8BL00 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdhr3Q8BL00 Gm21814-202ENSMUST00000203277 873 ntBASIC14.21□□□□□ -0.13
Cdhr3Q8BL00 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdhr3Q8BL00 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdhr3Q8BL00 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdhr3Q8BL00 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdhr3Q8BL00 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdhr3Q8BL00 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cdhr3Q8BL00 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdhr3Q8BL00 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.21□□□□□ -0.14
Cdhr3Q8BL00 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdhr3Q8BL00 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.21□□□□□ -0.14
Cdhr3Q8BL00 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms