Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Smg1Q8BKX6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smg1Q8BKX6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smg1Q8BKX6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smg1Q8BKX6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Smg1Q8BKX6 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Smg1Q8BKX6 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smg1Q8BKX6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smg1Q8BKX6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Smg1Q8BKX6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.72□□□□□ -0.21
Smg1Q8BKX6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smg1Q8BKX6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Smg1Q8BKX6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.72□□□□□ -0.21
Smg1Q8BKX6 Gm27437-201ENSMUST00000183429 107 ntBASIC13.72□□□□□ -0.21
Smg1Q8BKX6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smg1Q8BKX6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smg1Q8BKX6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smg1Q8BKX6 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.72□□□□□ -0.21
Smg1Q8BKX6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smg1Q8BKX6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smg1Q8BKX6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smg1Q8BKX6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smg1Q8BKX6 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smg1Q8BKX6 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smg1Q8BKX6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Smg1Q8BKX6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smg1Q8BKX6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smg1Q8BKX6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smg1Q8BKX6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smg1Q8BKX6 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smg1Q8BKX6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smg1Q8BKX6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smg1Q8BKX6 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smg1Q8BKX6 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Smg1Q8BKX6 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.71□□□□□ -0.22
Smg1Q8BKX6 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Smg1Q8BKX6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.71□□□□□ -0.22
Smg1Q8BKX6 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smg1Q8BKX6 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Smg1Q8BKX6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smg1Q8BKX6 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smg1Q8BKX6 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.71□□□□□ -0.22
Smg1Q8BKX6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Smg1Q8BKX6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.71□□□□□ -0.22
Smg1Q8BKX6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Smg1Q8BKX6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smg1Q8BKX6 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.71□□□□□ -0.22
Smg1Q8BKX6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smg1Q8BKX6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smg1Q8BKX6 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smg1Q8BKX6 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smg1Q8BKX6 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smg1Q8BKX6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smg1Q8BKX6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Smg1Q8BKX6 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Smg1Q8BKX6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smg1Q8BKX6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smg1Q8BKX6 Gm15653-201ENSMUST00000119247 907 ntBASIC13.7□□□□□ -0.22
Smg1Q8BKX6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smg1Q8BKX6 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smg1Q8BKX6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smg1Q8BKX6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smg1Q8BKX6 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.7□□□□□ -0.22
Smg1Q8BKX6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smg1Q8BKX6 Gm4459-201ENSMUST00000118750 468 ntBASIC13.7□□□□□ -0.22
Smg1Q8BKX6 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smg1Q8BKX6 Gm25857-201ENSMUST00000082788 129 ntBASIC13.7□□□□□ -0.22
Smg1Q8BKX6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smg1Q8BKX6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smg1Q8BKX6 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smg1Q8BKX6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.7□□□□□ -0.22
Smg1Q8BKX6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smg1Q8BKX6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smg1Q8BKX6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smg1Q8BKX6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
Smg1Q8BKX6 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.69□□□□□ -0.22
Smg1Q8BKX6 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smg1Q8BKX6 Gm13823-201ENSMUST00000119930 345 ntBASIC13.69□□□□□ -0.22
Smg1Q8BKX6 Gm4899-201ENSMUST00000178708 719 ntBASIC13.69□□□□□ -0.22
Smg1Q8BKX6 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.69□□□□□ -0.22
Smg1Q8BKX6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Smg1Q8BKX6 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.69□□□□□ -0.22
Smg1Q8BKX6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.69□□□□□ -0.22
Smg1Q8BKX6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smg1Q8BKX6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smg1Q8BKX6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Smg1Q8BKX6 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.69□□□□□ -0.22
Smg1Q8BKX6 Gm13597-201ENSMUST00000121239 375 ntBASIC13.69□□□□□ -0.22
Smg1Q8BKX6 Gm12497-201ENSMUST00000138778 237 ntBASIC13.69□□□□□ -0.22
Smg1Q8BKX6 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smg1Q8BKX6 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smg1Q8BKX6 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Smg1Q8BKX6 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms