Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim36Q80WG7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim36Q80WG7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim36Q80WG7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim36Q80WG7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim36Q80WG7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.75■□□□□ 0.11
Trim36Q80WG7 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim36Q80WG7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim36Q80WG7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.75■□□□□ 0.11
Trim36Q80WG7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trim36Q80WG7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trim36Q80WG7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim36Q80WG7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.74■□□□□ 0.11
Trim36Q80WG7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.74■□□□□ 0.11
Trim36Q80WG7 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim36Q80WG7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim36Q80WG7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim36Q80WG7 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim36Q80WG7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trim36Q80WG7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.73■□□□□ 0.11
Trim36Q80WG7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim36Q80WG7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim36Q80WG7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim36Q80WG7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim36Q80WG7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim36Q80WG7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim36Q80WG7 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim36Q80WG7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim36Q80WG7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim36Q80WG7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim36Q80WG7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim36Q80WG7 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim36Q80WG7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Trim36Q80WG7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim36Q80WG7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Trim36Q80WG7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim36Q80WG7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.72■□□□□ 0.11
Trim36Q80WG7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim36Q80WG7 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Trim36Q80WG7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim36Q80WG7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim36Q80WG7 Gm17661-201ENSMUST00000170317 270 ntBASIC15.72■□□□□ 0.11
Trim36Q80WG7 Gm45058-201ENSMUST00000205810 766 ntBASIC15.72■□□□□ 0.11
Trim36Q80WG7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim36Q80WG7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim36Q80WG7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trim36Q80WG7 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim36Q80WG7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim36Q80WG7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim36Q80WG7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trim36Q80WG7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.72■□□□□ 0.11
Trim36Q80WG7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim36Q80WG7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.72■□□□□ 0.11
Trim36Q80WG7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim36Q80WG7 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim36Q80WG7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim36Q80WG7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim36Q80WG7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim36Q80WG7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Trim36Q80WG7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.71■□□□□ 0.11
Trim36Q80WG7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim36Q80WG7 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim36Q80WG7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim36Q80WG7 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim36Q80WG7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim36Q80WG7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.71■□□□□ 0.11
Trim36Q80WG7 Gm7638-201ENSMUST00000121348 967 ntBASIC15.71■□□□□ 0.11
Trim36Q80WG7 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.71■□□□□ 0.11
Trim36Q80WG7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.71■□□□□ 0.11
Trim36Q80WG7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim36Q80WG7 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim36Q80WG7 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim36Q80WG7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim36Q80WG7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trim36Q80WG7 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trim36Q80WG7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trim36Q80WG7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim36Q80WG7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms