Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Usp8Q80U87 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Usp8Q80U87 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Usp8Q80U87 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Usp8Q80U87 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.36■□□□□ 0.21
Usp8Q80U87 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.35■□□□□ 0.21
Usp8Q80U87 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Usp8Q80U87 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.35■□□□□ 0.21
Usp8Q80U87 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.35■□□□□ 0.21
Usp8Q80U87 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.35■□□□□ 0.21
Usp8Q80U87 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.35■□□□□ 0.21
Usp8Q80U87 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.35■□□□□ 0.21
Usp8Q80U87 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Usp8Q80U87 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.35■□□□□ 0.21
Usp8Q80U87 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Usp8Q80U87 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.35■□□□□ 0.21
Usp8Q80U87 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp8Q80U87 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp8Q80U87 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp8Q80U87 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Usp8Q80U87 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp8Q80U87 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp8Q80U87 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp8Q80U87 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.34■□□□□ 0.21
Usp8Q80U87 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp8Q80U87 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Usp8Q80U87 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.34■□□□□ 0.21
Usp8Q80U87 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.34■□□□□ 0.21
Usp8Q80U87 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Usp8Q80U87 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Usp8Q80U87 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp8Q80U87 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp8Q80U87 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Usp8Q80U87 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp8Q80U87 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp8Q80U87 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp8Q80U87 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp8Q80U87 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Usp8Q80U87 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp8Q80U87 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.34■□□□□ 0.21
Usp8Q80U87 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp8Q80U87 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp8Q80U87 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Usp8Q80U87 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp8Q80U87 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.33■□□□□ 0.21
Usp8Q80U87 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp8Q80U87 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.33■□□□□ 0.21
Usp8Q80U87 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Usp8Q80U87 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.33■□□□□ 0.21
Usp8Q80U87 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp8Q80U87 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp8Q80U87 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp8Q80U87 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.33■□□□□ 0.2
Usp8Q80U87 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.33■□□□□ 0.2
Usp8Q80U87 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.33■□□□□ 0.2
Usp8Q80U87 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.33■□□□□ 0.2
Usp8Q80U87 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.33■□□□□ 0.2
Usp8Q80U87 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp8Q80U87 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms