Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1gQ80T11 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1gQ80T11 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.78■□□□□ 0.44
Ush1gQ80T11 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1gQ80T11 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.78■□□□□ 0.44
Ush1gQ80T11 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.78■□□□□ 0.44
Ush1gQ80T11 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1gQ80T11 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1gQ80T11 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1gQ80T11 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1gQ80T11 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ush1gQ80T11 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1gQ80T11 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1gQ80T11 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.78■□□□□ 0.44
Ush1gQ80T11 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ush1gQ80T11 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ush1gQ80T11 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ush1gQ80T11 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.77■□□□□ 0.44
Ush1gQ80T11 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ush1gQ80T11 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ush1gQ80T11 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ush1gQ80T11 Mir5131-201ENSMUST00000175426 93 ntBASIC17.77■□□□□ 0.44
Ush1gQ80T11 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.77■□□□□ 0.44
Ush1gQ80T11 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.77■□□□□ 0.44
Ush1gQ80T11 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.77■□□□□ 0.44
Ush1gQ80T11 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ush1gQ80T11 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ush1gQ80T11 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.77■□□□□ 0.44
Ush1gQ80T11 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ush1gQ80T11 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ush1gQ80T11 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ush1gQ80T11 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ush1gQ80T11 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ush1gQ80T11 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ush1gQ80T11 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1gQ80T11 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1gQ80T11 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1gQ80T11 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1gQ80T11 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1gQ80T11 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1gQ80T11 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1gQ80T11 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1gQ80T11 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1gQ80T11 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Ush1gQ80T11 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ush1gQ80T11 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.76■□□□□ 0.43
Ush1gQ80T11 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.76■□□□□ 0.43
Ush1gQ80T11 Gm27867-201ENSMUST00000184778 125 ntBASIC17.76■□□□□ 0.43
Ush1gQ80T11 Gm8000-201ENSMUST00000188378 592 ntBASIC17.76■□□□□ 0.43
Ush1gQ80T11 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.76■□□□□ 0.43
Ush1gQ80T11 Gm2213-201ENSMUST00000197485 688 ntBASIC17.76■□□□□ 0.43
Ush1gQ80T11 Gm44430-201ENSMUST00000203376 995 ntBASIC17.76■□□□□ 0.43
Ush1gQ80T11 Gm10060-201ENSMUST00000212002 111 ntBASIC17.76■□□□□ 0.43
Ush1gQ80T11 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.76■□□□□ 0.43
Ush1gQ80T11 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Ush1gQ80T11 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1gQ80T11 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ush1gQ80T11 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1gQ80T11 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ush1gQ80T11 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1gQ80T11 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1gQ80T11 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1gQ80T11 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1gQ80T11 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1gQ80T11 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ush1gQ80T11 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1gQ80T11 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1gQ80T11 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1gQ80T11 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1gQ80T11 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.75■□□□□ 0.43
Ush1gQ80T11 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.75■□□□□ 0.43
Ush1gQ80T11 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.75■□□□□ 0.43
Ush1gQ80T11 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Ush1gQ80T11 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1gQ80T11 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.75■□□□□ 0.43
Ush1gQ80T11 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1gQ80T11 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1gQ80T11 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1gQ80T11 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1gQ80T11 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1gQ80T11 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1gQ80T11 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ush1gQ80T11 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1gQ80T11 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1gQ80T11 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ush1gQ80T11 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1gQ80T11 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1gQ80T11 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1gQ80T11 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1gQ80T11 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ush1gQ80T11 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1gQ80T11 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1gQ80T11 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.74■□□□□ 0.43
Ush1gQ80T11 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1gQ80T11 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ush1gQ80T11 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1gQ80T11 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ush1gQ80T11 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.74■□□□□ 0.43
Ush1gQ80T11 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ush1gQ80T11 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms