Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
ShprhQ7TPQ3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
ShprhQ7TPQ3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC22.95■■□□□ 1.26
ShprhQ7TPQ3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
ShprhQ7TPQ3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
ShprhQ7TPQ3 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
ShprhQ7TPQ3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC22.95■■□□□ 1.26
ShprhQ7TPQ3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ShprhQ7TPQ3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC22.95■■□□□ 1.26
ShprhQ7TPQ3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ShprhQ7TPQ3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ShprhQ7TPQ3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
ShprhQ7TPQ3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
ShprhQ7TPQ3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC22.94■■□□□ 1.26
ShprhQ7TPQ3 Gm44492-201ENSMUST00000197012 141 ntBASIC22.94■■□□□ 1.26
ShprhQ7TPQ3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
ShprhQ7TPQ3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ShprhQ7TPQ3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ShprhQ7TPQ3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
ShprhQ7TPQ3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ShprhQ7TPQ3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ShprhQ7TPQ3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ShprhQ7TPQ3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
ShprhQ7TPQ3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC22.93■■□□□ 1.26
ShprhQ7TPQ3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
ShprhQ7TPQ3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC22.93■■□□□ 1.26
ShprhQ7TPQ3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
ShprhQ7TPQ3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC22.93■■□□□ 1.26
ShprhQ7TPQ3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ShprhQ7TPQ3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
ShprhQ7TPQ3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ShprhQ7TPQ3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ShprhQ7TPQ3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
ShprhQ7TPQ3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC22.93■■□□□ 1.26
ShprhQ7TPQ3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC22.93■■□□□ 1.26
ShprhQ7TPQ3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ShprhQ7TPQ3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ShprhQ7TPQ3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ShprhQ7TPQ3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
ShprhQ7TPQ3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ShprhQ7TPQ3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ShprhQ7TPQ3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
ShprhQ7TPQ3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
ShprhQ7TPQ3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
ShprhQ7TPQ3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC22.92■■□□□ 1.26
ShprhQ7TPQ3 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC22.92■■□□□ 1.26
ShprhQ7TPQ3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
ShprhQ7TPQ3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ShprhQ7TPQ3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ShprhQ7TPQ3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ShprhQ7TPQ3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ShprhQ7TPQ3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC22.91■■□□□ 1.26
ShprhQ7TPQ3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
ShprhQ7TPQ3 Gm18489-201ENSMUST00000172565 551 ntBASIC22.91■■□□□ 1.26
ShprhQ7TPQ3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC22.91■■□□□ 1.26
ShprhQ7TPQ3 Gm45612-201ENSMUST00000211320 160 ntBASIC22.91■■□□□ 1.26
ShprhQ7TPQ3 Gm45747-201ENSMUST00000212203 999 ntBASIC22.91■■□□□ 1.26
ShprhQ7TPQ3 Gm5366-201ENSMUST00000215494 1338 ntBASIC22.91■■□□□ 1.26
ShprhQ7TPQ3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
ShprhQ7TPQ3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ShprhQ7TPQ3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ShprhQ7TPQ3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
ShprhQ7TPQ3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC22.91■■□□□ 1.26
ShprhQ7TPQ3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ShprhQ7TPQ3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Gm14701-201ENSMUST00000117156 348 ntBASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Gm15427-201ENSMUST00000117288 531 ntBASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Gm43338-201ENSMUST00000198617 2223 ntBASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Gm27494-201ENSMUST00000184735 189 ntBASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Gm8396-201ENSMUST00000057361 823 ntBASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
ShprhQ7TPQ3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
ShprhQ7TPQ3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
ShprhQ7TPQ3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC22.89■■□□□ 1.26
ShprhQ7TPQ3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
ShprhQ7TPQ3 Gm13294-201ENSMUST00000121757 1330 ntBASIC22.89■■□□□ 1.25
ShprhQ7TPQ3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC22.89■■□□□ 1.25
ShprhQ7TPQ3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
ShprhQ7TPQ3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
ShprhQ7TPQ3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC22.89■■□□□ 1.25
ShprhQ7TPQ3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC22.89■■□□□ 1.25
ShprhQ7TPQ3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC22.89■■□□□ 1.25
ShprhQ7TPQ3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms