Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.09■□□□□ 0.33
Lsm8Q6ZWM4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lsm8Q6ZWM4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lsm8Q6ZWM4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lsm8Q6ZWM4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lsm8Q6ZWM4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Lsm8Q6ZWM4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Lsm8Q6ZWM4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lsm8Q6ZWM4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lsm8Q6ZWM4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm8Q6ZWM4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm8Q6ZWM4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm8Q6ZWM4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm8Q6ZWM4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm8Q6ZWM4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm8Q6ZWM4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm8Q6ZWM4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm8Q6ZWM4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm8Q6ZWM4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm8Q6ZWM4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm8Q6ZWM4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm8Q6ZWM4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm8Q6ZWM4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm8Q6ZWM4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm8Q6ZWM4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm8Q6ZWM4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm8Q6ZWM4 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.07■□□□□ 0.32
Lsm8Q6ZWM4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm8Q6ZWM4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm8Q6ZWM4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm8Q6ZWM4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm8Q6ZWM4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm8Q6ZWM4 Gm17808-201ENSMUST00000200859 894 ntBASIC17.07■□□□□ 0.32
Lsm8Q6ZWM4 Gm45328-201ENSMUST00000210942 917 ntBASIC17.07■□□□□ 0.32
Lsm8Q6ZWM4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm8Q6ZWM4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm8Q6ZWM4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm8Q6ZWM4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm8Q6ZWM4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.07■□□□□ 0.32
Lsm8Q6ZWM4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm8Q6ZWM4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm8Q6ZWM4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm8Q6ZWM4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Lsm8Q6ZWM4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Gm29518-201ENSMUST00000190858 372 ntBASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm8Q6ZWM4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm8Q6ZWM4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm8Q6ZWM4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm8Q6ZWM4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm8Q6ZWM4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm8Q6ZWM4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms