Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Gm6257-201ENSMUST00000163864 910 ntBASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn10aQ6QIY3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Scn10aQ6QIY3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn10aQ6QIY3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Scn10aQ6QIY3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn10aQ6QIY3 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.34■□□□□ 0.53
Scn10aQ6QIY3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn10aQ6QIY3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn10aQ6QIY3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn10aQ6QIY3 Mir6990-201ENSMUST00000183724 91 ntBASIC18.34■□□□□ 0.53
Scn10aQ6QIY3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.34■□□□□ 0.53
Scn10aQ6QIY3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn10aQ6QIY3 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.34■□□□□ 0.53
Scn10aQ6QIY3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn10aQ6QIY3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Scn10aQ6QIY3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn10aQ6QIY3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn10aQ6QIY3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn10aQ6QIY3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.34■□□□□ 0.53
Scn10aQ6QIY3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.34■□□□□ 0.53
Scn10aQ6QIY3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn10aQ6QIY3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Scn10aQ6QIY3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn10aQ6QIY3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn10aQ6QIY3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Scn10aQ6QIY3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.33■□□□□ 0.53
Scn10aQ6QIY3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Scn10aQ6QIY3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn10aQ6QIY3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn10aQ6QIY3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn10aQ6QIY3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.33■□□□□ 0.53
Scn10aQ6QIY3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn10aQ6QIY3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn10aQ6QIY3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.33■□□□□ 0.53
Scn10aQ6QIY3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn10aQ6QIY3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn10aQ6QIY3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn10aQ6QIY3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn10aQ6QIY3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn10aQ6QIY3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.33■□□□□ 0.52
Scn10aQ6QIY3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn10aQ6QIY3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn10aQ6QIY3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn10aQ6QIY3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Scn10aQ6QIY3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn10aQ6QIY3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn10aQ6QIY3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn10aQ6QIY3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn10aQ6QIY3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn10aQ6QIY3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.32■□□□□ 0.52
Scn10aQ6QIY3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn10aQ6QIY3 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn10aQ6QIY3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn10aQ6QIY3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Scn10aQ6QIY3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn10aQ6QIY3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn10aQ6QIY3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scn10aQ6QIY3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.31■□□□□ 0.52
Scn10aQ6QIY3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn10aQ6QIY3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Scn10aQ6QIY3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn10aQ6QIY3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn10aQ6QIY3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.31■□□□□ 0.52
Scn10aQ6QIY3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scn10aQ6QIY3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn10aQ6QIY3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn10aQ6QIY3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn10aQ6QIY3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn10aQ6QIY3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Scn10aQ6QIY3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC18.31■□□□□ 0.52
Scn10aQ6QIY3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Scn10aQ6QIY3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn10aQ6QIY3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn10aQ6QIY3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn10aQ6QIY3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.31■□□□□ 0.52
Scn10aQ6QIY3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn10aQ6QIY3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn10aQ6QIY3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms