Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Nup98Q6PFD9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.1■□□□□ 0.65
Nup98Q6PFD9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC19.1■□□□□ 0.65
Nup98Q6PFD9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup98Q6PFD9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup98Q6PFD9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup98Q6PFD9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup98Q6PFD9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nup98Q6PFD9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nup98Q6PFD9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC19.1■□□□□ 0.65
Nup98Q6PFD9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.09■□□□□ 0.65
Nup98Q6PFD9 Gm27702-201ENSMUST00000184512 56 ntBASIC19.09■□□□□ 0.65
Nup98Q6PFD9 Gm18622-201ENSMUST00000219361 595 ntBASIC19.09■□□□□ 0.65
Nup98Q6PFD9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nup98Q6PFD9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nup98Q6PFD9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nup98Q6PFD9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nup98Q6PFD9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Nup98Q6PFD9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.09■□□□□ 0.65
Nup98Q6PFD9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.09■□□□□ 0.65
Nup98Q6PFD9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC19.09■□□□□ 0.65
Nup98Q6PFD9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nup98Q6PFD9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Nup98Q6PFD9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nup98Q6PFD9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nup98Q6PFD9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nup98Q6PFD9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Nup98Q6PFD9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nup98Q6PFD9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nup98Q6PFD9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nup98Q6PFD9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Nup98Q6PFD9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nup98Q6PFD9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nup98Q6PFD9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nup98Q6PFD9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Nup98Q6PFD9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nup98Q6PFD9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Nup98Q6PFD9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.08■□□□□ 0.64
Nup98Q6PFD9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nup98Q6PFD9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.08■□□□□ 0.64
Nup98Q6PFD9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nup98Q6PFD9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Nup98Q6PFD9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nup98Q6PFD9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup98Q6PFD9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Nup98Q6PFD9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nup98Q6PFD9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup98Q6PFD9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup98Q6PFD9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup98Q6PFD9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Nup98Q6PFD9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup98Q6PFD9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC19.07■□□□□ 0.64
Nup98Q6PFD9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nup98Q6PFD9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nup98Q6PFD9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup98Q6PFD9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup98Q6PFD9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nup98Q6PFD9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Nup98Q6PFD9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup98Q6PFD9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup98Q6PFD9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nup98Q6PFD9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup98Q6PFD9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.06■□□□□ 0.64
Nup98Q6PFD9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.06■□□□□ 0.64
Nup98Q6PFD9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup98Q6PFD9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup98Q6PFD9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Nup98Q6PFD9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nup98Q6PFD9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nup98Q6PFD9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Nup98Q6PFD9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nup98Q6PFD9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup98Q6PFD9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.05■□□□□ 0.64
Nup98Q6PFD9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.05■□□□□ 0.64
Nup98Q6PFD9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup98Q6PFD9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup98Q6PFD9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup98Q6PFD9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup98Q6PFD9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Nup98Q6PFD9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nup98Q6PFD9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup98Q6PFD9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.04■□□□□ 0.64
Nup98Q6PFD9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup98Q6PFD9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup98Q6PFD9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nup98Q6PFD9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nup98Q6PFD9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup98Q6PFD9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup98Q6PFD9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Nup98Q6PFD9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup98Q6PFD9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nup98Q6PFD9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup98Q6PFD9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup98Q6PFD9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup98Q6PFD9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup98Q6PFD9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nup98Q6PFD9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Nup98Q6PFD9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Nup98Q6PFD9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.04■□□□□ 0.64
Nup98Q6PFD9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms