Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Abcf1Q6P542 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Abcf1Q6P542 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Abcf1Q6P542 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Abcf1Q6P542 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Abcf1Q6P542 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Abcf1Q6P542 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.27■□□□□ 0.52
Abcf1Q6P542 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Abcf1Q6P542 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Abcf1Q6P542 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Abcf1Q6P542 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Abcf1Q6P542 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Abcf1Q6P542 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Abcf1Q6P542 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.27■□□□□ 0.51
Abcf1Q6P542 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Abcf1Q6P542 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Abcf1Q6P542 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Abcf1Q6P542 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Gm13559-201ENSMUST00000120476 863 ntBASIC18.26■□□□□ 0.51
Abcf1Q6P542 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Abcf1Q6P542 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Gm7638-201ENSMUST00000121348 967 ntBASIC18.25■□□□□ 0.51
Abcf1Q6P542 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Abcf1Q6P542 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.24■□□□□ 0.51
Abcf1Q6P542 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abcf1Q6P542 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Abcf1Q6P542 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Abcf1Q6P542 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Abcf1Q6P542 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Abcf1Q6P542 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Abcf1Q6P542 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms