Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sp140Q6NSQ5 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.55■□□□□ 0.24
Sp140Q6NSQ5 Gm21559-201ENSMUST00000220638 855 ntBASIC16.55■□□□□ 0.24
Sp140Q6NSQ5 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sp140Q6NSQ5 Gm8587-201ENSMUST00000076538 843 ntBASIC16.55■□□□□ 0.24
Sp140Q6NSQ5 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sp140Q6NSQ5 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sp140Q6NSQ5 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sp140Q6NSQ5 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.55■□□□□ 0.24
Sp140Q6NSQ5 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.55■□□□□ 0.24
Sp140Q6NSQ5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sp140Q6NSQ5 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sp140Q6NSQ5 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sp140Q6NSQ5 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Sp140Q6NSQ5 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Gm22697-201ENSMUST00000175194 63 ntBASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sp140Q6NSQ5 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sp140Q6NSQ5 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Gm27389-201ENSMUST00000183622 195 ntBASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Gm37722-201ENSMUST00000193757 208 ntBASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Gm36967-201ENSMUST00000193814 266 ntBASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sp140Q6NSQ5 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sp140Q6NSQ5 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sp140Q6NSQ5 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sp140Q6NSQ5 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
Sp140Q6NSQ5 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sp140Q6NSQ5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sp140Q6NSQ5 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sp140Q6NSQ5 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms