Protein–RNA interactions for Protein: Q6DFV6

Fndc3c1, Fibronectin type III domain containing protein 3C1, mousemouse

Predictions only

Length 1,356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc3c1Q6DFV6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc3c1Q6DFV6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc3c1Q6DFV6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc3c1Q6DFV6 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc3c1Q6DFV6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.22■□□□□ 0.51
Fndc3c1Q6DFV6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc3c1Q6DFV6 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.22■□□□□ 0.51
Fndc3c1Q6DFV6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fndc3c1Q6DFV6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Fndc3c1Q6DFV6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc3c1Q6DFV6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc3c1Q6DFV6 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Fndc3c1Q6DFV6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Fndc3c1Q6DFV6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Fndc3c1Q6DFV6 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.21■□□□□ 0.51
Fndc3c1Q6DFV6 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc3c1Q6DFV6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc3c1Q6DFV6 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc3c1Q6DFV6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc3c1Q6DFV6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc3c1Q6DFV6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc3c1Q6DFV6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc3c1Q6DFV6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc3c1Q6DFV6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc3c1Q6DFV6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc3c1Q6DFV6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc3c1Q6DFV6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fndc3c1Q6DFV6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Fndc3c1Q6DFV6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc3c1Q6DFV6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.2■□□□□ 0.5
Fndc3c1Q6DFV6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc3c1Q6DFV6 Gm17271-201ENSMUST00000165535 355 ntBASIC18.2■□□□□ 0.5
Fndc3c1Q6DFV6 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc3c1Q6DFV6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.2■□□□□ 0.5
Fndc3c1Q6DFV6 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.2■□□□□ 0.5
Fndc3c1Q6DFV6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.2■□□□□ 0.5
Fndc3c1Q6DFV6 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.2■□□□□ 0.5
Fndc3c1Q6DFV6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc3c1Q6DFV6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc3c1Q6DFV6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Fndc3c1Q6DFV6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc3c1Q6DFV6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc3c1Q6DFV6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.2■□□□□ 0.5
Fndc3c1Q6DFV6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fndc3c1Q6DFV6 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fndc3c1Q6DFV6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fndc3c1Q6DFV6 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Fndc3c1Q6DFV6 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.19■□□□□ 0.5
Fndc3c1Q6DFV6 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Fndc3c1Q6DFV6 Gm37153-201ENSMUST00000193637 231 ntBASIC18.19■□□□□ 0.5
Fndc3c1Q6DFV6 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.19■□□□□ 0.5
Fndc3c1Q6DFV6 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.19■□□□□ 0.5
Fndc3c1Q6DFV6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Fndc3c1Q6DFV6 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Fndc3c1Q6DFV6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fndc3c1Q6DFV6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fndc3c1Q6DFV6 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fndc3c1Q6DFV6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fndc3c1Q6DFV6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fndc3c1Q6DFV6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.19■□□□□ 0.5
Fndc3c1Q6DFV6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fndc3c1Q6DFV6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fndc3c1Q6DFV6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 AA543401-201ENSMUST00000164248 1269 ntBASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 Wdyhv1-206ENSMUST00000227142 786 ntBASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.18■□□□□ 0.5
Fndc3c1Q6DFV6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fndc3c1Q6DFV6 Gm4899-201ENSMUST00000178708 719 ntBASIC18.17■□□□□ 0.5
Fndc3c1Q6DFV6 Gm27494-201ENSMUST00000184735 189 ntBASIC18.17■□□□□ 0.5
Fndc3c1Q6DFV6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fndc3c1Q6DFV6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Fndc3c1Q6DFV6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Fndc3c1Q6DFV6 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fndc3c1Q6DFV6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fndc3c1Q6DFV6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fndc3c1Q6DFV6 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Fndc3c1Q6DFV6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fndc3c1Q6DFV6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fndc3c1Q6DFV6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fndc3c1Q6DFV6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms