Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ltn1Q6A009 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ltn1Q6A009 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ltn1Q6A009 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ltn1Q6A009 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC19.19■□□□□ 0.66
Ltn1Q6A009 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ltn1Q6A009 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.19■□□□□ 0.66
Ltn1Q6A009 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC19.19■□□□□ 0.66
Ltn1Q6A009 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC19.19■□□□□ 0.66
Ltn1Q6A009 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ltn1Q6A009 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ltn1Q6A009 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ltn1Q6A009 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.19■□□□□ 0.66
Ltn1Q6A009 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Ltn1Q6A009 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.19■□□□□ 0.66
Ltn1Q6A009 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC19.19■□□□□ 0.66
Ltn1Q6A009 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ltn1Q6A009 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.19■□□□□ 0.66
Ltn1Q6A009 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC19.19■□□□□ 0.66
Ltn1Q6A009 Gm9682-201ENSMUST00000197505 556 ntBASIC19.19■□□□□ 0.66
Ltn1Q6A009 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ltn1Q6A009 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC19.19■□□□□ 0.66
Ltn1Q6A009 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ltn1Q6A009 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ltn1Q6A009 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ltn1Q6A009 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ltn1Q6A009 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ltn1Q6A009 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ltn1Q6A009 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ltn1Q6A009 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ltn1Q6A009 Gm14701-201ENSMUST00000117156 348 ntBASIC19.18■□□□□ 0.66
Ltn1Q6A009 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.18■□□□□ 0.66
Ltn1Q6A009 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ltn1Q6A009 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.18■□□□□ 0.66
Ltn1Q6A009 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ltn1Q6A009 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ltn1Q6A009 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ltn1Q6A009 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ltn1Q6A009 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ltn1Q6A009 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ltn1Q6A009 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Ltn1Q6A009 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ltn1Q6A009 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.18■□□□□ 0.66
Ltn1Q6A009 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ltn1Q6A009 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ltn1Q6A009 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ltn1Q6A009 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ltn1Q6A009 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC19.18■□□□□ 0.66
Ltn1Q6A009 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC19.17■□□□□ 0.66
Ltn1Q6A009 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.17■□□□□ 0.66
Ltn1Q6A009 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.17■□□□□ 0.66
Ltn1Q6A009 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ltn1Q6A009 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ltn1Q6A009 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC19.17■□□□□ 0.66
Ltn1Q6A009 Gm45167-201ENSMUST00000208007 322 ntBASIC19.17■□□□□ 0.66
Ltn1Q6A009 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ltn1Q6A009 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ltn1Q6A009 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ltn1Q6A009 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ltn1Q6A009 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ltn1Q6A009 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ltn1Q6A009 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC19.16■□□□□ 0.66
Ltn1Q6A009 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ltn1Q6A009 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.16■□□□□ 0.66
Ltn1Q6A009 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ltn1Q6A009 Gm4899-201ENSMUST00000178708 719 ntBASIC19.16■□□□□ 0.66
Ltn1Q6A009 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ltn1Q6A009 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ltn1Q6A009 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ltn1Q6A009 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ltn1Q6A009 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ltn1Q6A009 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ltn1Q6A009 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ltn1Q6A009 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ltn1Q6A009 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC19.16■□□□□ 0.66
Ltn1Q6A009 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Ltn1Q6A009 AC131709.1-201ENSMUST00000224731 1180 ntBASIC19.16■□□□□ 0.66
Ltn1Q6A009 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ltn1Q6A009 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ltn1Q6A009 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Ltn1Q6A009 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ltn1Q6A009 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ltn1Q6A009 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ltn1Q6A009 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ltn1Q6A009 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ltn1Q6A009 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ltn1Q6A009 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ltn1Q6A009 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ltn1Q6A009 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ltn1Q6A009 AC159114.1-201ENSMUST00000220349 266 ntBASIC19.15■□□□□ 0.66
Ltn1Q6A009 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ltn1Q6A009 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ltn1Q6A009 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.15■□□□□ 0.66
Ltn1Q6A009 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ltn1Q6A009 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ltn1Q6A009 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ltn1Q6A009 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ltn1Q6A009 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.15■□□□□ 0.66
Ltn1Q6A009 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ltn1Q6A009 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms