Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scube3Q66PY1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scube3Q66PY1 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scube3Q66PY1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scube3Q66PY1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scube3Q66PY1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scube3Q66PY1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
Scube3Q66PY1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scube3Q66PY1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Scube3Q66PY1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scube3Q66PY1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Scube3Q66PY1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Scube3Q66PY1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scube3Q66PY1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scube3Q66PY1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scube3Q66PY1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scube3Q66PY1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scube3Q66PY1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scube3Q66PY1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Scube3Q66PY1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Scube3Q66PY1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Scube3Q66PY1 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.07■□□□□ 0.32
Scube3Q66PY1 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Scube3Q66PY1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scube3Q66PY1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scube3Q66PY1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.07■□□□□ 0.32
Scube3Q66PY1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scube3Q66PY1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scube3Q66PY1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scube3Q66PY1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scube3Q66PY1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scube3Q66PY1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scube3Q66PY1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scube3Q66PY1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scube3Q66PY1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Gm28033-201ENSMUST00000184224 96 ntBASIC17.06■□□□□ 0.32
Scube3Q66PY1 Gm18669-201ENSMUST00000216049 778 ntBASIC17.06■□□□□ 0.32
Scube3Q66PY1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Scube3Q66PY1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Haglr-201ENSMUST00000100000 2085 ntBASIC17.06■□□□□ 0.32
Scube3Q66PY1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Scube3Q66PY1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Scube3Q66PY1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.05■□□□□ 0.32
Scube3Q66PY1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scube3Q66PY1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scube3Q66PY1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scube3Q66PY1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scube3Q66PY1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Scube3Q66PY1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.05■□□□□ 0.32
Scube3Q66PY1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scube3Q66PY1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Scube3Q66PY1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.05■□□□□ 0.32
Scube3Q66PY1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.05■□□□□ 0.32
Scube3Q66PY1 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.05■□□□□ 0.32
Scube3Q66PY1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scube3Q66PY1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scube3Q66PY1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Scube3Q66PY1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Scube3Q66PY1 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.05■□□□□ 0.32
Scube3Q66PY1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.05■□□□□ 0.32
Scube3Q66PY1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scube3Q66PY1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scube3Q66PY1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scube3Q66PY1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scube3Q66PY1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Scube3Q66PY1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Scube3Q66PY1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scube3Q66PY1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scube3Q66PY1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scube3Q66PY1 Gm13312-201ENSMUST00000119631 718 ntBASIC17.04■□□□□ 0.32
Scube3Q66PY1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.04■□□□□ 0.32
Scube3Q66PY1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.04■□□□□ 0.32
Scube3Q66PY1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scube3Q66PY1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scube3Q66PY1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
Scube3Q66PY1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms