Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col7a1Q63870 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.45□□□□□ -0.26
Col7a1Q63870 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Col7a1Q63870 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col7a1Q63870 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col7a1Q63870 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.45□□□□□ -0.26
Col7a1Q63870 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col7a1Q63870 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col7a1Q63870 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.45□□□□□ -0.26
Col7a1Q63870 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col7a1Q63870 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Col7a1Q63870 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Col7a1Q63870 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Col7a1Q63870 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Col7a1Q63870 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.44□□□□□ -0.26
Col7a1Q63870 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.44□□□□□ -0.26
Col7a1Q63870 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col7a1Q63870 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.44□□□□□ -0.26
Col7a1Q63870 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.44□□□□□ -0.26
Col7a1Q63870 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Col7a1Q63870 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col7a1Q63870 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col7a1Q63870 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col7a1Q63870 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col7a1Q63870 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.44□□□□□ -0.26
Col7a1Q63870 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col7a1Q63870 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.44□□□□□ -0.26
Col7a1Q63870 Gm16215-201ENSMUST00000161990 637 ntBASIC13.44□□□□□ -0.26
Col7a1Q63870 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.44□□□□□ -0.26
Col7a1Q63870 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col7a1Q63870 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col7a1Q63870 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col7a1Q63870 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col7a1Q63870 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col7a1Q63870 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col7a1Q63870 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col7a1Q63870 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.43□□□□□ -0.26
Col7a1Q63870 Gm28631-201ENSMUST00000190740 334 ntBASIC13.43□□□□□ -0.26
Col7a1Q63870 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Col7a1Q63870 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Col7a1Q63870 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Col7a1Q63870 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Col7a1Q63870 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Mir6404-201ENSMUST00000183699 94 ntBASIC13.43□□□□□ -0.26
Col7a1Q63870 Gm38294-201ENSMUST00000192831 381 ntBASIC13.43□□□□□ -0.26
Col7a1Q63870 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Col7a1Q63870 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Col7a1Q63870 Gm11425-201ENSMUST00000119608 498 ntBASIC13.43□□□□□ -0.26
Col7a1Q63870 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.43□□□□□ -0.26
Col7a1Q63870 Gm6266-201ENSMUST00000203844 806 ntBASIC13.43□□□□□ -0.26
Col7a1Q63870 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Gm9396-201ENSMUST00000076703 567 ntBASIC13.43□□□□□ -0.26
Col7a1Q63870 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Col7a1Q63870 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col7a1Q63870 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col7a1Q63870 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.42□□□□□ -0.26
Col7a1Q63870 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col7a1Q63870 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.42□□□□□ -0.26
Col7a1Q63870 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Col7a1Q63870 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col7a1Q63870 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.42□□□□□ -0.26
Col7a1Q63870 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.42□□□□□ -0.26
Col7a1Q63870 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col7a1Q63870 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.42□□□□□ -0.26
Col7a1Q63870 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col7a1Q63870 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Col7a1Q63870 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col7a1Q63870 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col7a1Q63870 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Col7a1Q63870 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col7a1Q63870 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.42□□□□□ -0.26
Col7a1Q63870 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.42□□□□□ -0.26
Col7a1Q63870 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.42□□□□□ -0.26
Col7a1Q63870 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.42□□□□□ -0.26
Col7a1Q63870 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms