Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AtmQ62388 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AtmQ62388 Gm8825-201ENSMUST00000182565 998 ntBASIC15.31■□□□□ 0.04
AtmQ62388 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AtmQ62388 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
AtmQ62388 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AtmQ62388 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
AtmQ62388 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
AtmQ62388 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AtmQ62388 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
AtmQ62388 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
AtmQ62388 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AtmQ62388 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AtmQ62388 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.3■□□□□ 0.04
AtmQ62388 Mir6990-201ENSMUST00000183724 91 ntBASIC15.3■□□□□ 0.04
AtmQ62388 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AtmQ62388 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
AtmQ62388 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AtmQ62388 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AtmQ62388 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AtmQ62388 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AtmQ62388 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
AtmQ62388 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.3■□□□□ 0.04
AtmQ62388 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AtmQ62388 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AtmQ62388 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AtmQ62388 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AtmQ62388 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AtmQ62388 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AtmQ62388 Gm13823-201ENSMUST00000119930 345 ntBASIC15.29■□□□□ 0.04
AtmQ62388 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AtmQ62388 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AtmQ62388 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AtmQ62388 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AtmQ62388 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
AtmQ62388 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.29■□□□□ 0.04
AtmQ62388 Gm13365-201ENSMUST00000121188 973 ntBASIC15.29■□□□□ 0.04
AtmQ62388 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AtmQ62388 Gm7653-201ENSMUST00000214567 508 ntBASIC15.29■□□□□ 0.04
AtmQ62388 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.29■□□□□ 0.04
AtmQ62388 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AtmQ62388 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
AtmQ62388 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AtmQ62388 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AtmQ62388 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AtmQ62388 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
AtmQ62388 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
AtmQ62388 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.28■□□□□ 0.04
AtmQ62388 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
AtmQ62388 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AtmQ62388 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.28■□□□□ 0.04
AtmQ62388 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AtmQ62388 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.28■□□□□ 0.04
AtmQ62388 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.28■□□□□ 0.04
AtmQ62388 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.28■□□□□ 0.04
AtmQ62388 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.28■□□□□ 0.04
AtmQ62388 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.28■□□□□ 0.04
AtmQ62388 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
AtmQ62388 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AtmQ62388 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AtmQ62388 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AtmQ62388 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AtmQ62388 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
AtmQ62388 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AtmQ62388 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AtmQ62388 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AtmQ62388 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AtmQ62388 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.28■□□□□ 0.04
AtmQ62388 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AtmQ62388 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AtmQ62388 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AtmQ62388 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
AtmQ62388 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AtmQ62388 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AtmQ62388 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
AtmQ62388 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
AtmQ62388 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.28■□□□□ 0.04
AtmQ62388 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AtmQ62388 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
AtmQ62388 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AtmQ62388 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AtmQ62388 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
AtmQ62388 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.27■□□□□ 0.04
AtmQ62388 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AtmQ62388 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AtmQ62388 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
AtmQ62388 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AtmQ62388 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AtmQ62388 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.27■□□□□ 0.04
AtmQ62388 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AtmQ62388 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AtmQ62388 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AtmQ62388 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AtmQ62388 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
AtmQ62388 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AtmQ62388 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AtmQ62388 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AtmQ62388 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AtmQ62388 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AtmQ62388 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms